Detailed information on CNT30576379


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521356Oryza barthiiSetaria italica47.4326.1286.62157forward
CNT30553729Oryza barthiiOryza glaberrima10053.56100331forward
CNT30104896Oryza barthiiOryza longistaminata84.2936.997.85279forward
CNT30101614Oryza barthiiOryza rufipogon90.6330.7195.67300forward

Expression of CNT30576379

Peptides detected in this lncRNA

>peptide 1 (39 aa)
AGNILFLSDASGRPFNFFTISLPIISKCGCKLESPSANA*

Sequence

>CNT30576379
TGCTGGTAATATATTGTTCTTATCTGATGCAAGTGGGAGGCCTTTCAACTTCTTCACAATTTCCTTGCCTATAATTTCTAAATGTGGGTGCAAACTGGAG
TCACCATCAGCAAATGCATAGCTCCTGAACAAGTTCCAGCAATCATTTTCAGATAACTGCTTTAGAAAGGTCCTCATTCCAAACATCATCAAGTACTAGA
AGAAATCTTTTACCTTCCAGCTTTTTTGAGAGATCTTCTTGAAGCAAGTTCATGTTGGTCGTGACCGATGAGAACCCACTGGCAACTGATTCAATGGTTT
CCTTGGTAAGCTTCATTTCGTCAAAATTTTC