CANTATAdb - search

Detailed information on CNT30576181

BLAST search results

BLAST vs Swiss-Prot:
sp|Q0JBZ8|HCT1_ORYSJ, E-value = 4e-74

BLAST vs NONCODE: nothing found

Expression of CNT30576181

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRWLWIGYHPCSRLGGQTPALHRRCHQDP*

>peptide 2 (32 aa)
MTAAPSATCKRYASPDMCSKNCICAETWCTFS*

>peptide 3 (32 aa)
NLLNRSKSIAPMTHLKVFYLRTLALQLLPDIT*

>peptide 4 (55 aa)
MSTAVGGGVVLLAVTDWGTEDSMAGAGWYSTCGYDGVGGSRARRRVRSMKGMMAI*

Sequence

>CNT30576181
AATTTGCTCAACAGGAGCAAGAGCATAGCCCCCATGACTCACTTGAAGGTATTTTACCTGAGAACTCTAGCTCTACAACTTCTCCCTGACATAACATAAG
TAGTCTGCTTACACCTCGAAGATCAGCTTCCTGAACTTCTCCATGTGCTCAGCCTGCAATGAGATGGCTATGGATAGGCTACCATCCTTGTTCGCGCTTG
GGAGGACAAACGCCAGCCCTTCATAGGCGATGCCACCAGGACCCATGAACACTGGTCTTCCCCATCCAAAATCGGCATCATGAATTGGCAAGCGCACCCA
GCTGGTGAGCCCGAGGTTCGGACACCGGAAAGTGTGTGCTCCACGGACCAATGCTGATAAATCAGGCTGCAGCTCCAGGTAGTCCAATGCTGAGCGGCAG
TAGCTATCTTTCATCCTATCTAGCGCCTCTTGGATGACTGCTGCTCCATCTGCCACGTGCAAGAGATACGCATCGCCAGACATGTGCAGCAAGAACTGCA
TATGTGCTGAAACGTGGTGCACCTTCTCCTGATGGGAGCTGCGAACGCAGTCGACCAAGGTCTGAGCGGGTAAGCTTGAAAATGTCCACAGCAGTTGGAG
GTGGTGTTGTCTTATTAGCAGTAACAGACTGGGGTACGGAGGACAGCATGGCTGGGGCAGGCTGGTACTCAACATGTGGGTATGATGGAGTTGGTGGATC
TCGGGCTCGTAGGAGAGTGCGGTCAATGAAGGGCATGATGGCAATTTGAGTTCCTC