Detailed information on CNT30576123


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597212Oryza barthiiOryza meridionalis26.292.9590.9166reverse complement
CNT30369953Oryza barthiiOryza glumipatula52.1924.1390.84131forward
CNT30604317Oryza barthiiOryza punctata20.322.890.251reverse complement

Expression of CNT30576123

Peptides detected in this lncRNA

>peptide 1 (78 aa)
RVRGSSGGVLGSWRSSDFYLDECSFLGGIPKEYWSCRYTLLRVRRTSIKDRTRCSPTRKQKLVETMKLKKGGDTPKYY*

Sequence

>CNT30576123
AGAGTGAGGGGAAGCTCTGGAGGAGTGCTCGGAAGTTGGCGCTCATCCGACTTCTACCTCGACGAGTGTAGCTTTCTAGGAGGAATTCCGAAGGAGTACT
GGAGCTGTCGGTACACTCTGCTCCGGGTTCGAAGAACTTCTATAAAAGATCGAACCCGATGCAGCCCAACTCGAAAGCAAAAACTCGTTGAAACAATGAA
ATTAAAAAAGGGTGGTGATACGCCAAAGTATTATTGAACTGTCGTCCTTTG