Detailed information on CNT30576113


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3088158Oryza barthiiVigna radiata20.395.5692.3152forward
CNT30256205Oryza barthiiAvena sativa38.827.9486.8799reverse complement

Expression of CNT30576113

Peptides detected in this lncRNA

>peptide 1 (57 aa)
LCNDLPSPGRAHLHLIAFIGHRLPSHTNTCLFCTLCPHSCAPGKNFTHPKLLQAKHA*

>peptide 2 (55 aa)
MSFLHTLSSLVCTREEFHPSQIAPGQARLTLEFFGDWLPEKKLQLVDMSILLILLS

Sequence

>CNT30576113
ATTGTGTAACGACCTGCCTTCCCCAGGCCGGGCCCACTTACATCTGATAGCTTTCATAGGTCATAGACTGCCCTCACACACCAACACATGTCTTTTCTGC
ACACTTTGTCCTCACTCGTGTGCACCCGGGAAGAATTTCACCCATCCCAAATTGCTCCAGGCCAAGCACGCTTAACCCTGGAGTTCTTTGGAGATTGGCT
TCCGGAAAAGAAGTTGCAACTTGTTGATATGAGTATTCTATTAATCCTATTAAGC