Detailed information on CNT30576012


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226544Oryza barthiiHordeum vulgare32.6213.1998.6876forward
CNT30266045Oryza barthiiBrassica rapa49.7926.1997.41116reverse complement
CNT30369364Oryza barthiiOryza glumipatula44.2124.7695.15103reverse complement
CNT30335253Oryza barthiiCynara cardunculus20.175.3593.6247reverse complement

Expression of CNT30576012

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MKTRFRYXSGGFRSLNQATAYESPAHSSTGTRSEITFPSHYLGAQHGFTLYFTTHWRFNV

>peptide 2 (38 aa)
MSRRLILQQARGQRSLSPPTTWELSTVSRYISLPTGGSM

Sequence

>CNT30576012
CTGGTATATTATGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATCGCCCTATGAAGACTCGCTTTCGCTACNGCTCCGGTGGGTTCCGTTCCCTTAA
CCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACTTTCCCCTCCCACTACTTGGGAGCTCAGCACGGTTTCACG
TTATATTTCACTACCCACTGGAGGTTCAATGTC