Detailed information on CNT30575951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693247Oryza barthiiOryza sativa25.1215.35100109forward
CNT30673304Oryza barthiiSetaria viridis16.1322.6595.7170forward
CNT30521311Oryza barthiiSetaria italica74.1927.0689.75322forward
CNT30592165Oryza barthiiMusa acuminata20.5131.6792.1389forward
CNT30553602Oryza barthiiOryza glaberrima31.3429.31100136forward
CNT30610520Oryza barthiiGossypium raimondii35.7118.6183.23155forward
CNT30679064Oryza barthiiTriticum urartu29.4913.6888.28128forward
CNT30362130Oryza barthiiSorghum bicolor33.1843.3788.89144forward
CNT3038429Oryza barthiiCucumis melo18.4325.2483.7580forward
CNT30497116Oryza barthiiDigitaria exilis23.2710.2594.06101forward
CNT30113199Oryza barthiiFicus carica40.7840.684.18177forward
CNT30333083Oryza barthiiCynara cardunculus23.2727.3785.15101forward
CNT30726195Oryza barthiiLupinus angustifolius30.1822.0281.68131forward

Expression of CNT30575951

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MCSRNKPVVAMHPGYSDANVIPVSSWNLRWNSCIVSMLQILLSLYALA

Sequence

>CNT30575951
AAAAAAATTACTAATTGTACATCACTTGACAGGCCTCTCTCACTGAAAGCTGAAACCCCCTAAACCCCGAAGAAATTAACAGTTGAAACGAATGGGTAAA
TAATAAACTCAGGCGAGAGCTGGTTCTCGAACGACGCCGAGTCCTTGTTCCAGCTCCAGTACACGCCGGACTTGGTCAGGCTCGGGTCGCCCACCACCTG
CGCCAGCCGCTTCCCGGACTCCGCCTCCGACACGAACCCCTTCGTCACGAACCGCTGGAACGGCGGGAACAGCAGCCGGAACAGCGGGATGTGCTCGCGG
AACAAGCCCGTCGTCGCGATGCACCCCGGGTACAGCGACGCGAACGTGATCCCGGTCTCCTCGTGGAATCTCCGGTGGAACTCCTGCATCGTCAGCATGT
TACAGATCTTGCTGTCCTTGTACGCCTTGGCGCC