Detailed information on CNT30575932


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84R49|GUN10_ORYSJ, E-value = 4e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595853Oryza barthiiOryza meridionalis81.7929.1799.58238forward

Expression of CNT30575932

Peptides detected in this lncRNA

>peptide 1 (73 aa)
VELTDRLILGLVLDHTPAEHGHGPGHGVVELDGVSCVVEASDQALPDGAVGEAILHARIPPPADAVMLRQRTS*

>peptide 2 (40 aa)
MQEFPLQLTPLCFGSGPADIQNDTSSEDRDGDGGRKGVKKL

Sequence

>CNT30575932
GTCGAGCTCACCGATCGCCTCATACTTGGCCTTGTACTCGATCACACTCCAGCTGAGCATGGTCATGGACCAGGCCATGGGGTAGTTGAACTTGATGGCG
TCTCCTGCGTCGTAGAAGCCTCCGACCAAGCTCTTCCGGACGGTGCTGTCGGAGAGGCCATCCTTCATGCAAGAATTCCCCCTCCAGCTGACGCCGTTAT
GCTTCGGCAGCGGACCAGCTGACATTCAGAACGATACATCGTCAGAAGACAGAGATGGAGACGGAGGGAGGAAAGGAGTGAAAAAACTCAC