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Detailed information on CNT30575793


BLAST search results

BLAST vs Swiss-Prot:
sp|F4IVN9|ENL20_ARATH, E-value = 2e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553023Oryza barthiiOryza glaberrima50.5861.7199.67303forward
CNT30105640Oryza barthiiOryza longistaminata18.0347.79100108forward
CNT30101099Oryza barthiiOryza rufipogon50.2551.4598.67301forward

Expression of CNT30575793

Peptides detected in this lncRNA

>peptide 1 (46 aa)
VKWKRRDKWWIKKCCYLQDSRCRVKTTPSLNLQSSSEFLHLGRMID*

Sequence

>CNT30575793
TAGTAAAGTGGAAAAGGAGAGACAAATGGTGGATTAAAAAATGCTGTTATCTCCAAGATTCAAGATGCAGAGTCAAAACTACTCCGTCTCTGAACCTGCA
GAGTAGCTCTGAATTTCTTCACCTTGGTAGAATGATTGACTGATCTTTGCTCAATTGACAGCTTACGGCTTACGCAAATCCACACTAATAATCGAGGTTC
TACTAAAATTTCCAGGGTTCCAAACACACTAAAAAAATCAGGGGAGGACCTCCAAATCAGACGAAGACAGCAGACAACGATACTACTACTAGCAGCTAAA
ACATCCTGAGAATCGCGGCGAGCACGGCGGCGGCGGCGGCGTAGAAGAGCGAGGCGCATGCCGCCGAAGCAGTAGCCGTAGCTGCAGATGAAGTAGTAGG
TCTTGGTCTCGTTGAGCTCGAAGGCGTAGGTGCGGCCCTTGCTGTAGTTGGAGATGGCGTTGGTGGCGTCGCACGTATTGTACCCCGCCGCCCAGTCGCC
CTTGTAGAAGGGGCCGTGCTGGGCGGGCCAGTCGGAGTAGTTGGTGTTGGGCTTCCAGTTGATGGAGAACTTGTTCGCCGTCGTGGTCGACGGCAGCGC