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Detailed information on CNT30575765

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30691986	Oryza barthii	Oryza sativa	34.83	90.67	100	272	forward
CNT30369960	Oryza barthii	Oryza glumipatula	34.57	43.41	100	270	forward
CNT30101016	Oryza barthii	Oryza rufipogon	59.54	100.87	99.14	465	forward

Expression of CNT30575765

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MHCCNCNCRVGAWLLQVYTWYVGWHHLDRVVVLTCRGRSWWRMPSIAHREWITSSSLFLANVSGSADSPAVSHP*

>peptide 2 (29 aa)
RVNIFLSRSQGPAGARERETQARNAGVLA*

>peptide 3 (48 aa)
MVRWLAPSRSCRCAHLPGTKLVAYAQHRPPRVDHLQLPVPRERLRVGR*

>peptide 4 (37 aa)
MRRRLGWFFVVCGGDGRRGRGDLYTAYEWRSGGLVDAR

Sequence

>CNT30575765
CCCGAGTGAACATTTTCCTTAGCCGCTCGCAGGGTCCAGCTGGGGCGCGGGAGCGCGAGACGCAAGCCCGCAACGCTGGCGTGCTCGCGTGAACTGGGTC
CCGCACCGATTTATTGGGTCGACGCACAAATTGGCATCGTTTTAGCTGGCTTCGTTGTAGATCCTATAATAACGATACATCATTAATTCGATCATCCCTT
GGATGCGGCCTGCGGCTTACATTAAATCTCGATCCAAAGAAGCAAAGATGATGACAGACAGAAATTAATTAAGCTAGAAATCTCCTCGATCGATCACACA
CACACACACACACAATTAAGGTACATACATACATGCACTGCTGCAACTGCAACTGCAGGGTCGGTGCGTGGCTACTACAAGTGTACACATGGTACGTTGG
TTGGCACCATCTCGATCGTGTCGTTGTGCTCACTTGCCGGGGACGAAGTTGGTGGCGTATGCCCAGCATCGCCCACCGCGAGTGGATCACCTCCAGCTCC
CTGTTCCTCGCGAACGTCTCCGGGTCGGCCGATAGCCCCGCCGTGTCCCACCCGTAGTCTCCCGGGAACTCTCCGGTCAGGTACGATGGCGTCTGCTCCG
AGAACGGGCCCAGGAAGCTGGTGGTCTGGTGCAGCGCCGACGCGGCCATCGTTCTAACGAGGGCGATGCGGCGGCGGTTGGGTTGGTTTTTTGTGGTGTG
TGGTGGAGATGGGCGGCGCGGGAGGGGAGATCTTTATACGGCGTACGAGTGGCGGAGCGGTGGACTGGTGGACGCGCGGCG