Detailed information on CNT30575392


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595676Oryza barthiiOryza meridionalis32.5725100100forward
CNT30100554Oryza barthiiOryza rufipogon10093.0398.37307forward
CNT30115868Oryza barthiiOryza nivara87.3100.7597.76268forward
CNT30603594Oryza barthiiOryza punctata85.9991.3590.53264forward

Expression of CNT30575392

Peptides detected in this lncRNA

>peptide 1 (41 aa)
CECRVLHPAEVNQLQYIYKHKQRTQFLLLKYRHTMPGITRY*

Sequence

>CNT30575392
TGCGAATGTAGGGTACTCCATCCAGCTGAGGTAAACCAACTCCAATATATATACAAACACAAACAACGTACCCAATTTTTGCTGTTAAAATACAGGCACA
CAATGCCTGGTATCACACGTTATTAAGTAGACAGACTAGATAACCATGACACGGACAGGGACTTCTTGCCACTGGTTTACGCACGGTTAATATTACAGAC
CACACATAGAGAGACGGCTTAGCTATTTGCAAATAAGCTTGACAAGATAGATGATGCTCCAAAAGGATGCAATCTCAGCAGTTGAGTACTTACGCTGGTT
CATCTAG