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Detailed information on CNT30575318

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30603715	Oryza barthii	Oryza punctata	61.61	60.94	89.02	337	forward

Expression of CNT30575318

Peptides detected in this lncRNA

>peptide 1 (32 aa)
EKYSICFVMLIVVPWCNDNLLSQLSVVCSKLY*

>peptide 2 (55 aa)
MVLENFMRTVESRTPEPPEAKLAPFMADAAAIIMLLITSPLLLASMAMRESDEAT*

>peptide 3 (65 aa)
MKLLRLLLTYEVDADEAIAEPPRRLAAGEVDTVVREVGPGTDSGQVIVVPDVDRRVAEHEDRRNLR

Sequence

>CNT30575318
CTGAGAAGTACTCTATCTGCTTTGTCATGCTGATTGTAGTCCCCTGGTGCAATGATAATTTGTTAAGTCAGTTGTCAGTTGTGTGCAGTAAACTGTACTA
GTAGTTGCACTTTGGAAAAGTAAGTAACCAAATTTTGAACCAGGGAGCAGAATTTATAGAAGGTTGGAAGAAAATTTTCAACTTTAGGATCAAAATGGTT
TTGGAGAATTTTATGCGTACTGTGGAATCAAGAACACCGGAGCCTCCGGAAGCAAAGCTGGCTCCTTTCATGGCGGATGCAGCTGCCATCATCATGTTGC
TCATCACCTCACCACTGCTGTTAGCATCCATGGCGATGAGAGAGAGTGATGAAGCTACTTAGACTACTACTCACCTATGAAGTCGACGCCGATGAGGCCA
TTGCTGAACCTCCCCGTCGGCTCGCCGCCGGGGAAGTCGACACCGTTGTGAGGGAAGTCGGCCCTGGCACCGATTCCGGCCAGGTAATTGTTGTTCCCGA
CGTCGACCGTCGAGTCGCCGAACACGAAGATCGCCGGAACCTTCGCC