Detailed information on CNT30575280


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100329Oryza barthiiOryza rufipogon97.4670.76100346forward

Expression of CNT30575280

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MYITKRREFRYELQYSFAITNLQGQFKHEHHHDPSLYDN*

>peptide 2 (77 aa)
RVSCVQNTIKSYLSGVIHSISQCKCTSQNVGNFDMNCNTVSPLQICKASLNMNTTMIHHSMTINLHPQSHQQIITSS*

Sequence

>CNT30575280
TCGAGTCTCTTGTGTTCAAAATACAATAAAATCTTATTTATCTGGAGTAATACATAGCATTTCCCAGTGTAAATGTACATCACAAAACGTAGGGAATTTC
GATATGAACTGCAATACAGTTTCGCCATTACAAATTTGCAAGGCCAGTTTAAACATGAACACCACCATGATCCATCACTCTATGACAATTAATTTACACC
CACAGAGTCATCAGCAGATAATCACATCCAGTTAAGCTCTTCACTGAAAGTCTGAAACCATCCATGGCCTAAACTACAGAGCACTACGCATGCAGCAGCA
GAGTGATCTCTCTCTCTCTAGGATTCAGGCCTCAGGATGCCATTGACGACGGAGA