Detailed information on CNT30575241


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30115881Oryza barthiiOryza nivara38.4941.15100107forward

Expression of CNT30575241

Peptides detected in this lncRNA

>peptide 1 (91 aa)
LAFRSSMSSSPVAAEDEVSSDDALARSRDSLGASWRRRGEGKLRWGRRRTEGGGKAPWSTPWRPCQSWTLFGSTWLFPGLCFLFLGYAAIVP

>peptide 2 (57 aa)
MEAERRGEVALGEEEDGGRRQGAVEHAVAAMSVVDPLRLYLALPWPLLSFPWLRGYRP

>peptide 3 (29 aa)
LSFQVFDELVAGRGGGRGVVGRRPRPEQR*

Sequence

>CNT30575241
CCTTAGCTTTCAGGTCTTCGATGAGCTCGTCGCCGGTCGCGGCGGAGGACGAGGTGTCGTCGGACGACGCCCTCGCCCGGAGCAGAGATAGCCTCGGTGC
GTCATGGAGGCGGAGAGGAGAGGGGAAGTTGCGCTGGGGGAGGAGGAGGACGGAGGGCGGCGGCAAGGCGCCGTGGAGCACGCCGTGGCGGCCATGTCAG
TCGTGGACCCTCTTCGGCTCTACCTGGCTCTTCCCTGGCCTCTGCTTTCTTTTCCTTGGCTACGCGGCTATCGTCCCG