Detailed information on CNT30575103


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369698Oryza barthiiOryza glumipatula90.3862.5599.7329forward
CNT30100073Oryza barthiiOryza rufipogon95.3310099.71347forward

Expression of CNT30575103

Peptides detected in this lncRNA

>peptide 1 (63 aa)
HFLQLRQERVPLADATEIIDRLLQVVLVLPEYLLVQIDLPKTHFLKFLQQFLFCEIVNAMMIR*

>peptide 2 (59 aa)
ISCNSARRGSHSLTPQRSSTDCSRLYLFCLSISLFRSTCLKPISSSSFSSFSSVRLSMP*

Sequence

>CNT30575103
CCATTTCCTGCAACTCCGCCAGGAGAGGGTCCCACTCGCTGACGCCACAGAGATCATCGACAGACTGCTCCAGGTTGTACTTGTTCTGCCTGAGTATCTC
CTTGTTCAGATCGACCTGCCTAAAACCCATTTCCTCAAGTTCCTTCAGCAGTTTCTCTTCTGTGAGATTGTCAATGCCATGATGATCAGATGATGATGCA
CCAACAGACGCAGGTGCATTACCAGCAGGCACATTAACAGTTGGAGGCACAGGAGTCACAGCAGTTGAACTGGAGGGAACATCAACATCAATGATGGGGT
GAAGAGATGTTGTGGAAGAAACAATGGGCACAGGTAATGGAGCAGGCTCAGGATTCTTGGGCTC