Detailed information on CNT30575034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697161Oryza barthiiOryza sativa45.0310099.02204forward
CNT30596976Oryza barthiiOryza meridionalis62.6998.2798.24284forward
CNT30370879Oryza barthiiOryza glumipatula49.2396.5499.1223reverse complement

Expression of CNT30575034

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGDRPGNSSRVHTSEDKVCRKDMCWCVRAVYDL*

Sequence

>CNT30575034
AGAACATCTACTATTAAAATAATAATTAACCGTAAATATAAGCACATGTGATAAATTAATATCTTGAACCGGATGAATAGGATAAGTAACATAACCAATT
CAATTACAATATCTAGTACTCCCTTCGTCCCAAAATATAAGTATTTTTAGCTATGAATCTGGATAAGTGTAACATCCCGGCCTAGGGCTTAATAGGATTA
ATAGAATACTCATATCAACAAGTTGCAACTTCTTTTCCGGAAGCCAATCTCCAAAGAACTCCAGGGTTAAGCGTGCTTGGCCTGGAGCAATTTGGGATGG
GTGACCGACCGGGAAATTCTTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTGTGTGAGGGCAGTCTATGACCTATGAAA
GCTATCAGATGTAAGTGGGCCCGGCCTGGGGGAAGGCGGGCCGTTACAATAAG