« Back to Oryza barthii search


Detailed information on CNT30575029


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30575029

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MLVYRSPMKDLGFGGSHPPDFLSRSGGGGVVRRGHTQVVVRTARGEVERRASSSLFSSP*

>peptide 2 (85 aa)
MLLSPNACFYSTTNLCDIIVDLAAGNIRFYQQLAVLASLISLAHGWEIGSRHCSMSLSPSSYRPRQRYIAPTRSRKFLSSLMIPM*

>peptide 3 (46 aa)
MGDWEPALLDVSLTLILSPASTIYSANQVQEVLKFFDDTHVADLLR*

Sequence

>CNT30575029
TTCCACGTCATCATTAATTCACAACTATTGGATCGGTATATTAGATCTCATCTGAACCGTCGGATTGAACACAACACGTGAGGCCTATATATTTCTTCCA
CCACAGGAGGCCCATGTCAATCTACCGCAGCCCAGGAGACCCATGTTAGTCTATCGCAGCCCAATGAAGGATTTAGGGTTCGGTGGGTCTCATCCTCCTG
ACTTCCTGAGTCGGAGCGGCGGCGGCGGCGTAGTGCGGCGCGGTCACACGCAGGTGGTGGTAAGGACAGCGCGCGGCGAGGTGGAGCGTCGTGCATCCTC
TTCACTCTTCAGCTCACCATGAATAGCATCCACCGTCTCCCCTCATCGACCAGGCATGATCTATTCTTCTATGATTTTTTTTGTATGAAACGGATTCAAT
AATAATCGTATTGTCCGTCAATGAAACCGTCGCCATCAAAGGGAAGCCGAGGGGCTATGTTTAAATTTTAATNCCATGTTTNATTCCTTTTTATGCTCCT
TTCACCTAACGCATGTTTTTATTCCACCACTAATCTCTGCGATATCATCGTTGATCTAGCTGCTGGCAACATACGTTTCTATCAGCAGCTAGCTGTCCTA
GCTAGCCTCATCAGTTTAGCGCATGGATGGGAGATTGGGAGCCGGCACTGCTCGATGTCTCTCTCACCCTCATCTTATCGCCCGCGTCAACGATATATAG
CGCCAACCAGGTCCAGGAAGTTCTTAAGTTCTTTGATGATACCCATGTAGCTGACCTTCTTCGATGATACTTTGTTCCCATATCTGATTGGTTGATGTTG
ATATACATTGCAATGTGTACGCACCAAACAAAGCAGTTGTTGTGTTCCTCTACATAGAGATTTTTACATCATCTCTGATATGTCTCATGTTTCTGTTAAT
TATCTCCTATCCCAGTCCACTTTCATGGGCTTTAAAGCTGCACTGCCAGTAAATTGAGGTGGTAAGCAGCCATCGAATCATCCGCTCCTAAAATTCTAAG
CATTCGTGACAAGTTAATAGATGCTACACTAAGACCTTGACTTTGCAACCTTCAGTCTCTAATTCTCTGCATGCATCATTTACTCCAG