Detailed information on CNT30574999


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690467Oryza barthiiOryza sativa10075.4697.58372forward
CNT3099590Oryza barthiiOryza rufipogon99.7310097.84371forward

Expression of CNT30574999

Peptides detected in this lncRNA

>peptide 1 (32 aa)
TNCRDVDPNSTCGDRRHSLLLATLRLQLPRLG*

Sequence

>CNT30574999
ACACTAACTGCCGAGATGTCGATCCCAATTCCACGTGTGGCGACCGGCGACACAGCTTGTTGCTTGCGACTCTGAGGCTGCAGCTGCCTCGCCTCGGCTA
GCTCCTGGCTCTTGGCTCCTGCTTTCCCCCTCCTCGTCCGCTCGTCATCCTCGACTTGACCCTCGACAGTTCATCCTCAGACTGGTACTTGTCCATGGCG
ACCATCCCTTGGTCCCGGCCGAACCCGCTCATCTTGTACCCGCCGAACGGCGCGTCGGGGTCGAAGGCGAAGTAGCAGTTCACCCACACCGTGCCGGCCC
GCACTGACCTCGACACCATGTTGGCAATGTTGAGGTTCTTGGTCACAATGCCGGCAGCCAGCCCGTACTTGG