Detailed information on CNT30574981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30668492Oryza barthiiTriticum dicoccoides12.2826.5491.0756forward

Expression of CNT30574981

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MKSVTTLAAAALGRCMVPVRYVTRFTAIPIVDSRSHSSIPSTSAAATHPPVADLSAGHPR*

>peptide 2 (58 aa)
VVELVGAEAGDAGLEAAGAEGDEVEADVEHGHLHRRRLLPGRRGGRCRWTGRGRRRRW*

Sequence

>CNT30574981
CGGTCGTCGAACTGGTCGGTGCCGAAGCCGGAGACGCTGGACTTGAGGCCGCCGGTGCCGAGGGCGATGAGGTAGAGGCAGACGTAGAGCACGGCCATCT
GCACCGGCGTCGGCTGCTCCCCGGGCGGCGAGGAGGGCGGTGCCGATGGACTGGACGAGGGCGAAGACGGCGATGGTGAGGTAGCGGCCGAGGAAGGAGT
CGGCGAGGAAGCCGCCGAGGAGGCAGAGGAGGAAGGAGGTGCCCATGAAGTCGGTGACGACGTTGGCGGCGGCGGCGCTGGGGAGGTGCATGGTGCCCGT
CAGGTACGTCACCAGGTTCACCGCGATCCCCATCGTCGACAGCCGCTCGCACAGCTCGATCCCCAGCACCAGCGCCGCCGCCACCCACCCCCCCGTCGCC
GACCTGTCCGCCGGGCATCCCCGGTAGTCCACCGCGTCCCGCACCATGTTCCCCCC