Detailed information on CNT30574959


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZU9|RBOHJ_ARATH, E-value = 2e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693878Oryza barthiiOryza sativa74.2111.9787.71236forward
CNT30220737Oryza barthiiHordeum vulgare30.1917.289.5896forward
CNT30552202Oryza barthiiOryza glaberrima84.2841.49100268forward
CNT30661171Oryza barthiiTriticum dicoccoides29.567.8188.394forward
CNT3099899Oryza barthiiOryza rufipogon68.5534.99100218forward

Expression of CNT30574959

Peptides detected in this lncRNA

>peptide 1 (40 aa)
RIPCCRRRYPHHFWHVEVTEPWQSKLTLRRLLHTRWSAKN*

>peptide 2 (84 aa)
MAIKADLASPSSYTLVSEELRVRQYIVITFSDIVHDSFKPLEGPLLSGHPVEVSSSWPIVLEAAYLRTMYAFHLLLPSTHFSYLF

Sequence

>CNT30574959
CGAATACCCTGCTGCCGGAGACGATATCCACACCATTTTTGGCATGTTGAAGTGACTGAACCATGGCAATCAAAGCTGACCTTGCGTCGCCTTCTTCATA
CACGCTGGTCAGCGAAGAATTGAGAGTGAGACAGTACATTGTGATCACTTTCAGCGACATCGTTCATGACTCCTTTAAACCACTCGAAGGACCCTTGCTC
TCTGGTCACCCAGTAGAAGTAAGCTCTTCCTGGCCCATTGTTCTTGAAGCTGCCTATCTCAGAACCATGTATGCTTTCCACCTCCTGTTGCCATCAACTC
ATTTTAGTTATCTATTTC