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Detailed information on CNT30574954


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690292Oryza barthiiOryza sativa10068.2296.44337forward
CNT3099839Oryza barthiiOryza rufipogon10083.2196.44337forward
CNT30115665Oryza barthiiOryza nivara97.6392.1696.96329forward

Expression of CNT30574954

Peptides detected in this lncRNA

>peptide 1 (40 aa)
RANRKRVKRSEAARFVRPWCTGDQTLLSLFCWNKTRMEEH*

Sequence

>CNT30574954
CTAGAGCGAACCGAAAAAGGGTGAAGCGAAGCGAAGCGGCGAGGTTTGTCCGGCCGTGGTGTACCGGTGACCAGACTCTTCTCTCCTTGTTCTGTTGGAA
TAAGACGCGAATGGAAGAACATTGATCGGTGTGTTGCTACGGAATTGGAGCGAAATAGGCGTGCGGCGGCCAGTACAAGCGAAGCTCCATCTTGTACGTC
GTCCGAGTCCGGCCACGCGTGTCCACCGGCGACGACCGGACGTAGCCAACGGCGTACAAGAAGTCGCCGGTGCCACCGACCACCGGGTACACGGACGGCC
TGGTGATGTTGGGCGTGCCCCCGAGGATGGAGACGGA