Detailed information on CNT30574936


BLAST search results

BLAST vs Swiss-Prot:
sp|C0LGD8|Y1755_ARATH, E-value = 3e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30134944Oryza barthiiLolium perenne33.2429.5584.62117forward
CNT30110740Oryza barthiiOryza longistaminata70.1710097.17247forward

Expression of CNT30574936

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MTFFFRGVEVADCLSLEIGKHTLSTETTSVMLGLSIDAFSRQFMARSITVCRWMV*

Sequence

>CNT30574936
AGACTGAAAGGAGCTGCCCTCGTAGCTTGTTGTTGAAGCTCCAGAAATCATCAACTGGAACTGTCTTGGAATCTCTGCATCCATGACGTTCTTCTTTCGA
GGGGTTGAAGTTGCCGATTGTCTCTCGCTTGAAATCGGCAAGCACACCTTAAGCACGGAAACAACCTCGGTCATGCTTGGCCTGTCAATCGATGCGTTTT
CGAGGCAGTTCATGGCGAGGTCTATCACAGTCTGCAGGTGGATGGTTTGAGGGTCCATGAATACCGGGGGTTGACCAGTCACAATCTCCAAGAGGACGAT
TCCGAAACTGTAAACGTCTGTCTTAACAGTAAGCTGGAAAGTGGCATGGTAC