Detailed information on CNT30574898


BLAST search results

BLAST vs Swiss-Prot:
sp|C0HLV2|NEPRN_NEPVE, E-value = 2e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690049Oryza barthiiOryza sativa9819.2699.18245forward

Expression of CNT30574898

Peptides detected in this lncRNA

>peptide 1 (60 aa)
WWFEMVGGINNLDCSAVGGLAEPFLREMSTAHGCGNLRRIHLPTPLHSIGNACLQEGKDG*

Sequence

>CNT30574898
TGGTGGTTTGAGATGGTTGGAGGAATCAACAACTTGGATTGCTCTGCTGTAGGTGGCCTTGCCGAACCCTTCCTCAGGGAAATGTCCACTGCCCATGGGT
GCGGTAATTTGAGGAGAATACACCTCCCCACCCCACTCCACAGTATCGGCAACGCCTGTCTGCAGGAGGGTAAAGATGGATGATGGCCAGTAGCCCACAT
AATTGCCTTGCAGTTGCAACCACCAGTTGCCCCCCGCTGGGTCCTGCAAA