Detailed information on CNT30574824


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690610Oryza barthiiOryza sativa10025.0699.52209forward
CNT30185545Oryza barthiiSecale cereale44.545.3788.1793forward
CNT30455311Oryza barthiiSaccharum spontaneum34.936.5293.1573reverse complement
CNT30353440Oryza barthiiEragrostis tef52.158.3385.32109reverse complement
CNT30595519Oryza barthiiOryza meridionalis97.61100100204forward
CNT30369233Oryza barthiiOryza glumipatula10068.52100209forward
CNT3099654Oryza barthiiOryza rufipogon10049.0699.52209forward
CNT30497582Oryza barthiiDigitaria exilis99.0499.0489.86207forward
CNT30603436Oryza barthiiOryza punctata97.6180.6396.57204forward
CNT30550503Oryza barthiiOryza brachyantha97.6143.9794.12204forward

Expression of CNT30574824

Peptides detected in this lncRNA

>peptide 1 (33 aa)
HYLIMNLIDNMIWSCVQSSFPQPKKMSTSIYFV*

Sequence

>CNT30574824
CATTACCTCATAATGAATTTGATTGATAATATGATCTGGTCGTGTGTCCAAAGTTCCTTTCCTCAACCAAAAAAAATGAGCACCTCTATCTATTTTGTGT
AGTCCTGCTAGCCTGAGGACACAGCCTCCTGCCTCAAGAACAACATTCTCTGCTTTTAGAAGGACATCAGTACGAGGGCTTCTGCCAATTGGCACAGATG
GGCAATCCT