Detailed information on CNT30574799


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690449Oryza barthiiOryza sativa7168.9698.07311forward
CNT3099918Oryza barthiiOryza rufipogon90.4162.17100396forward
CNT30117885Oryza barthiiOryza nivara64.6132.3199.29283forward

Expression of CNT30574799

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MIVLIINKSSSFSPATYYKKLLYYYYILHVALTQISVIKMALYHRQVHIVNHQITDKSIQILR*

Sequence

>CNT30574799
GGACTAAACAGGGAAAGGTAAAGCATTTCATATGGTTCACAGATAGAATCTTCCTCATCTTCCAGCCAAAATGATTGTACTAATCATTAACAAATCATCA
TCGTTCTCCCCAGCAACTTATTACAAGAAACTTCTCTATTACTACTACATTTTGCATGTCGCTCTTACACAAATAAGTGTCATCAAGATGGCATTATATC
ATCGACAAGTACATATAGTTAATCATCAAATCACAGACAAATCAATTCAAATTTTAAGATAAGTTTAAAACCTCAAATCTCTCCAATGTATACGTCGTCT
TATAATCTTATACTATCTTCTAGGTCTTCTTGGGGGCAAACTTGGCCTTGATCTTGTCCACCTCCTCGTCGTCGATCTGGAAGGCCTTGGCGAGGACGGC
GCCGCGGGGGAAGACGAAGACGTCGCCCTGGGAGATGG