CANTATAdb - search

Detailed information on CNT30574795

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006839, E-value = 2e-132

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30690670	Oryza barthii	Oryza sativa	77.29	96.04	98.45	388	forward

Expression of CNT30574795

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSYASCVVIALPRAARAMSDLLQLGSCPVGLP*

>peptide 2 (49 aa)
VLYLKIIIIIKSWFEMHFTCNVLKETLIFTELPFSAPESLSFSYLPNHK*

Sequence

>CNT30574795
ATGTACTTTACTTAAAAATAATCATTATTATAAAATCTTGGTTTGAAATGCATTTTACTTGTAATGTACTAAAGGAAACGTTAATATTTACAGAACTGCC
ATTTTCAGCACCTGAGAGCTTGTCATTTTCATATCTCCCAAACCATAAGTGATAATCTGATTCGGAGATTCCGGAGAGTAACGAGCCATATCCCGAGGAG
GATAGTGACTACCCTCAGCAGCAAGGAGAGGATTCCGGTTATGAGTTATGCTTCTTGTGTGGTCATTGCTCTGCCGAGGGCGGCGAGGGCAATGAGTGAT
CTCTTGCAGCTTGGCTCTTGCCCGGTTGGTTTGCCCTAGTGGGGTTGTGGCACCACTGGTTTTATCTTTTGCTTATGAACTCTATTTGAGACTTCCGCTG
CTATATTTATGTGTTGTATGTTGAGACCTTGGACCCTATTATGTGTCATGTACCTCGCCGCACTTTAACCCTATTATGGTACTTGCTATGTTTATTAATT
GC