Detailed information on CNT30574707


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002304, E-value = 4e-120

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30496834Oryza barthiiDigitaria exilis25.252.248875reverse complement

Expression of CNT30574707

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MSFLHTLSSLVCTREEFPGQSPIPNCSRSSTLNPGVLWRLVSGKEVTTC*

>peptide 2 (97 aa)
MIPPICNVPPLPGRARLHLIAFIGHKLPSQTNTCLFCTLCPHSCAPGKNFPVSHPSQIAPGQAHLTLEFFGDWFPEKKLQLVDMSILLILLSPRPGCY

Sequence

>CNT30574707
CATGATCCCCCCAATCTGTAACGTCCCGCCTCTCCCAGGCCGGGCCCGCTTACATCTGATAGCTTTCATAGGTCATAAACTGCCCTCACAGACCAACACA
TGTCTTTTCTGCACACTTTGTCCTCACTCGTGTGCACCCGGGAAGAATTTCCCGGTCAGTCACCCATCCCAAATTGCTCCAGGTCAAGCACACTTAACCC
TGGAGTTCTTTGGAGATTGGTTTCCGGAAAAGAAGTTACAACTTGTTGATATGAGTATTCTATTAATCCTATTAAGCCCTAGGCCGGGATGTTACAC