Detailed information on CNT30574703


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001788, E-value = 5e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694488Oryza barthiiOryza sativa6.7835.8288.8250reverse complement
CNT30106078Oryza barthiiOryza longistaminata7.2494.0194.76267forward

Expression of CNT30574703

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MHFFLYPASYGLWLQWLAVYLVQEVLSTLLHSSDDHTGSGHLLHDRGSIMVYSCSHYLHAFLHAQ*

>peptide 2 (50 aa)
MLLELISILMPFFSMSQGYKISEFCHLLVNKKHQCLFFSGRSCSLVVAVT*

>peptide 3 (46 aa)
MRNRAFYLIVFYLLINLQERRKQHCLTTLQTQLMRAQTNQQDSNRF*

>peptide 4 (38 aa)
MVASWSATATATLLKCSHAISNQLMALISEYSLFLCSI*

>peptide 5 (33 aa)
MLLCSVFLCKSPPQPTISYTKKEKSVILKPAPN*

>peptide 6 (33 aa)
MLIFCLFSVPFMTPVKPISLRHTLSFMLFLLQV*

>peptide 7 (35 aa)
MSSNLHRSKFHIGLFDGLSSQFKNTTYIRLDVEAG*

>peptide 8 (35 aa)
MFDRRAIHVAPRAGRRRGFSSWQFFKKDLCFIYNL*

>peptide 9 (31 aa)
MQANSGNETRYCLQQEENLGHKQKTNSVYMEN

>peptide 10 (29 aa)
MGFPEDIVRSALKIVDGDENMILEKLCSV*

>peptide 11 (61 aa)
MMALGAGTCVTIPYFLLLDRGLCRVPPSVWKKMYCYRVIRSICYSIGYTEYNLSVTVTTCA*

>peptide 12 (94 aa)
MISPTPQHAILCFPLSHRPSPTPSQRRCPDPRMHHLQIWRWLGFGLEWWLAAGRTRVRSGGAAAGAVAACARQQVAGGDARRQRRRAACGRSSS*

>peptide 13 (57 aa)
MRKAAGRRWGRAEAASTRSVRAQQQLATAQCTGAWSRPGLLLLLLLYSSAHMLFLIS*

>peptide 14 (51 aa)
MTTLDLVICCMIEDPSWCIHVVIISMLSFMLSEWRLKTENWLVLLQVRLKI*

>peptide 15 (43 aa)
MEENVLLPSYTEYLLFHWIYGVQLICDCDHMCISWFKTLNGLP*

Sequence

>CNT30574703
AAGACAGGTTTCCTGGTATTATTCAGGTGAAAAAGATTGGAAAGAATTCTAATAAGTGAAATGTCCCCAGACTACTGCATGTCTAAAAACAAAAGTCAAT
AGTGATGTTCAGTGTCTTGGATGCTGCTGGAGTTAATTTCTATTCTGATGCCCTTTTTCTCAATGAGCCAAGGATATAAAATTAGCGAATTCTGCCATCT
ACTTGTCAACAAGAAGCATCAATGTTTATTCTTTAGCGGAAGGTCATGTAGTCTAGTGGTTGCAGTAACCTGAGTAGCACCCCAAGATCATGAGTTCAAA
TCTCCATAGGAGCAAATTTCATATTGGTTTATTTGATGGACTAAGTTCCCAATTTAAAAATACTACATATATCCGGTTGGATGTAGAGGCCGGCTAAAAA
ATACACTTCTCTAAGAAAATATCAATACCCACAGATTAGAAAAAAGAATGACATAATGGCATATCTGTTATGGCATGTGCTGAAAAGGTGAAAAAAAATT
ACCCACCACTATGTAGATATAATAAGTAGACTAAGGGCACCCGCAATGGTTATCTATAGGCTCTCTACAAGAGATCCATGTCAACATATTTTCTTACTTG
GAATATATTAAATGAAGAGAGAGAGCAAAACTATCTACTAACCTAGAGATAGTCTATAGAGAAAAACGAGGCAATGCATTAGAGAGCTATAGATACCGAT
GTAAACATACTATTGAGGTGATTTACTATTAATCTAGTCTATTGCTGAGATGTACATGTTTTATAGAGAGCACCTTACTTTACCATTGCGGGTGCTCTAA
CAGACAGAAATCACATGGTGACAGTTGCATGGTCCCATATAATGAAAACGTCCATCACTCATTTATGCTGTAAATGATCTAGTGATTCACGATAGAGAAC
AGAGAAAGATGAGCATGGAGGACATGAATCGGTTATATTAAAACCTGACCCCAATTGAACCTCCCACAACGATTTGGAGTCGCGTGTTCGATCGCCGTGC
TATCCACGTCGCCCCGCGCGCTGGAAGGCGGAGAGGTTTTTCGAGCTAGCAATTTTTCAAAAAAGACCTTTGTTTTATATATAATTTGTAATAGGTCCCT
CACGATATGCTTCTATGTTCTGTATTCTTATGTAAAAGCCCTCCACAACCTACTATATCTTATACGAAGAAGGAAAAATCGGTTATATTAAAACCTGCCC
CCAATTGAACCTCCCACAACGATTTGGAGTTGCATGTTCGATCGCCGCGCTATCCACGTCGCCCCGCGCGCTGGAAGGCGGAGAGGTTTTTCGAGCTGGC
AATTTTTCAAAAAAGACCTTTGTTTTATATATAATTTGTAATAGGTCCCTCACTATATGTTTCTATGTTCTGTATTCTTATGTAAAAGCCCTCCACAACC
TACTATATCTTATACGAAGAAGGAAAAAATGGGAAAATAGGGCTGCGCTCTGATAAACGAAAAGTGAGGGGTTTTTCTGAAAAAACAAAAATCCCTACCC
ACCCCACCCCACCCGAAACCCTAGCTGCCACTGTTCCCTACCTTTCCCCTCTCCTTCTCTCGCTCTCTCCTCTTTCCTTGCGACGGGCGACAGCCGCCGC
CCCGTCTTTCCCTCCACCTGGCTTGCTTCTCCTCGTCGGCGATGATCTCTCCCACACCACAACACGCCATCCTCTGCTTCCCGCTGTCTCATCGCCCCTC
TCCCACTCCGTCGCAGCGTCGCTGCCCCGACCCGAGGATGCACCACCTTCAGATCTGGCGGTGGCTAGGGTTTGGCTTGGAGTGGTGGCTTGCAGCAGGC
CGGACGCGGGTGCGCAGCGGCGGTGCAGCAGCTGGCGCAGTCGCAGCATGCGCAAGGCAGCAGGTCGCCGGTGGGGACGCGCGGAGGCAGCGTCGACGCG
CAGCGTGCGGGCGCAGCAGCAGCTAGCAACAGCCCAGTGCACGGGCGCATGGTCGCGTCCTGGTCTGCTACTGCTACTGCTACTCTACTCAAGTGCTCAC
ATGCTATTTCTAATCAGCTAATGGCACTAATAAGTGAGTATTCCCTATTTCTCTGTAGCATTTAGGTAGACTCTGGACTCTAATCTATTTATCTTTTGAA
TGAGAAACAGAGCCTTCTATTTAATAGTTTTTTATTTACTGATAAACTTGCAAGAGAGAAGAAAACAACATTGTTTAACTACTTTACAAACCCAATTGAT
GAGAGCACAAACCAACCAACAAGATTCGAATAGATTTTGATCCTAATGAAATTCTTTTCAGCACGATGAATGACAATGGAGGATATGTTGGTGGATGCAG
TTACATTTGTTTCTTTGGTTTAAGATTTGTTTTCCGTTGATTTGTCACTAATTTGCTACTTTGCATATATAGCTGGCTGCTCACTTGACTTTTGGCTAAG
GCCTAAAAGAATGCACTTTGTGCTGGCAAAGTACTCCTTTTTTTCCTTTTCTATCATGTGAACATTTAATTTGACTTGTAAGAGGAAGGGGAAAAGAAGG
GAGTAAGAGGCAGTTTGGTCTCAGAAGAATGCACTTTTTTCTTTACCCTGCCTCTTACGGTTTGTGGCTGCAATGGCTAGCAGTGTATCTGGTTCAAGAA
GTCTTATCGACGTTGTTGCATTCTTCTGATGACCACACTGGATCTGGTCATTTGTTGCATGATAGAGGATCCATCATGGTGTATTCATGTAGTCATTATC
TCCATGCTTTCCTTCATGCTCAGTGAATGGAGACTGAAGACTGAAAACTGGTTGGTGCTCTTGCAGGTGAGATTGAAGATATAAAATTGGTCGGGGCTCT
GGTAAGCTTTGTAATGGAGAAATTTTGCAACTCTAGCTGTTTGTTTCATAGCTTCTCAAATTGCTGGGAAAAGGTAGAGATGAAAACATGATGGCTAGAG
CTACAGTGTGGACCAATGATGGCACTTGGAGCTGGTACCTGCGTGACTATTCCATATTTTCTGCTACTGGATAGAGGCCTTTGCAGAGTACCTCCGTCGG
TATGGAAGAAAATGTATTGTTACCGAGTTATACGGAGTATTTGTTATTCCATTGGATATACGGAGTACAACTTATCTGTGACTGTGACCACATGTGCATA
AGTTGGTTTAAAACTTTAAATGGGCTTCCCTGAAGACATCGTGAGGAGTGCTCTGAAGATTGTCGACGGCGACGAGAACATGATTCTTGAAAAGCTCTGC
TCTGTCTAAGGCCCTATGGTCGATATGAACTGTAAATTAAATCCCCATTTGTAATAAGACAACAGTGCTTGCTAATGCTCATTTTCTGTCTTTTCAGTGT
GCCCTTTATGACACCTGTAAAACCTATTAGCTTGAGGCACACATTAAGTTTTATGTTATTTTTGTTACAAGTATAATGGTTATGCCCATGAATAAATGGA
AATGGTGTAAATTGAGGTTAACAATATGATGGTTCCAAGAGCTTTTTCTTTGTGATTCTTTAGCCAGCTGATAGGGCGCGCAACGCGCGCGGTAATGTCT
AGTATAGTTAAAGCATACATGAAATAAGGTCCTATTAGAAAATTTTCATCATAGCATTCAACCTATAGGCCTCCAATGTTACGTCATTGAAATGCAAGCT
AATTCAGGAAATGAAACAAGGTACTGTCTTCAACAAGAAGAAAATTTAGGACACAAACAAAAGACAAATTCAGTTTACATGGAAAACTC