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Detailed information on CNT30574695

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30552167	Oryza barthii	Oryza glaberrima	37.6	64.6	99.47	188	forward
CNT30105740	Oryza barthii	Oryza longistaminata	37.6	27.21	92.02	188	forward
CNT3099807	Oryza barthii	Oryza rufipogon	73.8	37.01	99.46	369	forward

Expression of CNT30574695

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MASPTSEVCTLHKPTSPPPMTQRCRIYALQSLNPSESSPLRVSGAQIFLLKK*

>peptide 2 (58 aa)
MANPRPNPNPEKRNNTISTDFFLEGITFRIVMLMQPLDSGGPHKSLFPRNELLVNVEK*

Sequence

>CNT30574695
ATGGCGTCGCCCACCTCCGAGGTCTGTACACTCCATAAACCAACCTCTCCTCCTCCCATGACGCAGCGTTGCCGGATCTACGCCCTCCAGAGTCTGAACC
CCTCCGAATCCTCTCCGTTGCGTGTCTCTGGGGCTCAGATTTTCTTACTGAAGAAATAACAGAAGCAATCGATGGAATAACTCAACAACATCTCAGCAAT
GGCCAACCCAAGGCCGAATCCCAATCCAGAAAAGAGGAACAACACAATATCTACGGATTTCTTCTTGGAAGGGATCACATTCAGAATTGTCATGTTGATG
CAACCTTTAGATAGCGGAGGACCACACAAATCATTATTCCCCAGAAATGAGCTGTTGGTGAATGTCGAGAAATGAAGTGATTCAGCTGATTTGAAGATAG
ATCCAAAGCTTCCAGCTGCTTCAGCCCACCAAGTTGAGATGGAATTGGCCCAGTGAGGAAGTTATGTGACATATTTATCCCATGAGTTAAAACAAGTTCC