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Detailed information on CNT30574614

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30690797	Oryza barthii	Oryza sativa	36.75	26.32	100	215	forward
CNT30552282	Oryza barthii	Oryza glaberrima	41.2	42.58	100	241	forward
CNT30369445	Oryza barthii	Oryza glumipatula	34.87	34	99.51	204	forward
CNT3099999	Oryza barthii	Oryza rufipogon	36.58	27.97	100	214	forward

Expression of CNT30574614

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MASWPACRRRRGSRACRRRGQVSRRRGRRTWACCRSRRG*

>peptide 2 (69 aa)
MQRRALHRAHYPRSSGDAAGDGEVSHGFLACLSAAAGEPGMPPPRPGEPPPRPPNMGMLPKPPRLNPGML

Sequence

>CNT30574614
TGAAACGGAGAGATGTGATGTGACACACCAGAAATGCTTATGTTTTGAAGCAGAGATAGTAATATATATAGCCATCACCATACAATAACACAATAATGAT
CACATTTAGCATTATTCATGCCTCGAGCTCGAAACAGTGGTAGTAATACTACATGATCACGAACTTAATTAAAACACAAAATATAAGAAGGGACCTAATT
AAAACAAACAAACACAACCAACCAACAAACAGATAGAATAATCCTCCTCCAAATGCATGTAAAGAAAAGAGATAGAAGAGACACTACTCATAATAGAACG
CTAGCTAGACACAGTGCAAGCTAACTGCACATATGAAGATATAACGCGCGCGCGTCATATAGCCATCCATATTGCATGCAACGCCGTGCGCTACATAGAG
CACATTACCCGCGCAGCAGCGGCGACGCCGCCGGCGACGGCGAGGTCTCTCATGGCTTCTTGGCCTGCTTGTCGGCGGCGGCGGGGGAGCCGGGCATGCC
GCCGCCGAGGCCAGGTGAGCCGCCGCCGAGGCCGCCGAACATGGGCATGCTGCCGAAGCCGCCGAGGCTGAACCCCGGGATGCTG