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Detailed information on CNT30574588

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30691040	Oryza barthii	Oryza sativa	29.38	3.47	97.35	151	reverse complement
CNT30101644	Oryza barthii	Oryza rufipogon	42.41	54.5	99.08	218	forward

Expression of CNT30574588

Peptides detected in this lncRNA

>peptide 1 (76 aa)
HRGRRVEGGSWLPLASGRPDLPARRPESPDPTVPASSLADAAREREDGDGRTTARRQQQLAVGSARGRSPTAGRRG*

>peptide 2 (29 aa)
MRGRHAAAAVAWAGERAEREERRQRNGGG*

Sequence

>CNT30574588
GCATAGAGGTAGAAGAGTAGAAGGCGGCTCCTGGCTTCCCCTCGCTTCAGGGCGGCCGGATCTGCCGGCGAGGAGGCCGGAGTCACCGGATCCGACAGTC
CCGGCCTCCTCGTTGGCGGATGCGGCGCGGGAGCGAGAGGATGGCGATGGCAGGACGACGGCGCGGCGACAGCAACAGCTCGCAGTAGGGAGTGCGCGGG
GGAGGTCGCCAACTGCGGGAAGAAGAGGATGAGGGGACGGCACGCGGCGGCGGCCGTCGCTTGGGCAGGAGAGAGAGCGGAGCGAGAGGAGAGGAGGCAG
AGGAATGGTGGCGGCTAGGGTTTGGGGAAAGGGGTGAGGGTTGTTTTTGTTTTGCAACAACACCCCTAAACTTCTAGTTTTCAGAGCGCGGTTCAATTCT
CCTTTTTTCGCTTCTTCATATAGAATATTGTTTTCTTAAGAGGTCCTCTAAGTAAGAGCGCACAACGTTAGAACTAAGGACCAGGGATCTATAACAAATT
ATCAAGTAAATAAA