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Detailed information on CNT30574572


BLAST search results

BLAST vs Swiss-Prot:
sp|P15688|NU2M_BETVU, E-value = 2e-112

BLAST vs NONCODE:
NONORUT000579, E-value = 2e-95

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677703Vitis viniferaSetaria viridis3.4564.896.98232forward
CNT30641355Vitis viniferaNymphaea colorata3.5321.7697.48238forward
CNT30532270Vitis viniferaEucalyptus grandis3.61102.5384.77243reverse complement
CNT30374346Vitis viniferaArabidopsis thaliana35.4961.3993.222390forward
CNT3019915Vitis viniferaCitrullus lanatus1.5129.9198.04102reverse complement
CNT30505424Vitis viniferaNicotiana attenuata3.449.1499.56229forward
CNT30708112Vitis viniferaGlycine max1.8140.6794.26122forward
CNT30635976Vitis viniferaCapsicum annuum3.7381.4996.41251reverse complement
CNT30184864Vitis viniferaSecale cereale3.4339.997.4231forward
CNT30284090Vitis viniferaTriticum aestivum3.4327.5396.97231forward
CNT30224696Vitis viniferaHordeum vulgare2.9790.9197.5200forward
CNT30393404Vitis viniferaTriticum turgidum17.67101.6292.861190forward
CNT30592560Vitis viniferaMusa acuminata5.9474.3591400forward
CNT3086242Vitis viniferaVigna radiata1.562885.71105reverse complement
CNT30655393Vitis viniferaRosa chinensis6.7468.3788.55454reverse complement
CNT30203049Vitis viniferaHelianthus annuus3.5690.9199.58240forward
CNT30627909Vitis viniferaDaucus carota18.5889.8795.61251forward
CNT30680683Vitis viniferaTriticum urartu7.84100.3895.83528forward
CNT30722000Vitis viniferaTriticum spelta1.9356.2896.92130reverse complement
CNT30364089Vitis viniferaSorghum bicolor3.0344.9392.65204forward
CNT30595740Vitis viniferaOryza meridionalis2.0252.9297.06136reverse complement
CNT30357348Vitis viniferaLactuca sativa7.0857.491.4477forward
CNT30705826Vitis viniferaPrunus avium4.2286.8596.48284forward
CNT30328885Vitis viniferaAsparagus officinalis1.1322.4993.4276reverse complement
CNT30575698Vitis viniferaOryza barthii2.4721.5990.96166reverse complement
CNT30551547Vitis viniferaOryza brachyantha6.1596.2894.69414forward
CNT30335924Vitis viniferaCynara cardunculus2.6622.1392.74179forward
CNT30725732Vitis viniferaLupinus angustifolius3.8857.8797.32261forward

Expression of CNT30574572

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MINQYEYNLHVQLNYELEVFLLSFGPWRPVLLRS*

>peptide 2 (34 aa)
MFVAVHRSQAPLRKPSSLSKSKKKEECCLIERRL*

>peptide 3 (36 aa)
MKEEVIASSNDLSRSIGSYRIHVLGVSKNILFAKRI*

>peptide 4 (37 aa)
MNEMSGDLPSPLLITKNFVATSGEEKLDHPTQKQLGA*

>peptide 5 (30 aa)
MMEKPASYGFKAYLIIIRMGKGFFYRFRGE*

>peptide 6 (59 aa)
MLWSQRPYEVVMSFTRSKPGPRAVRKIGRNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE*

>peptide 7 (37 aa)
MIKKEGELASYSRVRSLPSLPCSLSPMLKKGLEPCRE*

>peptide 8 (40 aa)
MKHLRVFHSVFQLDPGLAIVRPETTVFSRERGAFCERLST*

>peptide 9 (41 aa)
MEKVIAEIGFVLARAPKSAIYLTRVCRNAKTMANASIVIDA*

>peptide 10 (41 aa)
MHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

>peptide 11 (49 aa)
MPPFSSLKSTTNKWERQDSNLRRKTSTDLQSVAFDHSATLPFPGRGPPQ*

>peptide 12 (67 aa)
MSPTDLRPPSTLLSFFPCPFRMRFARHWRFALLLFFIGRFGWTSPFFPNSNRKGCITSRCRFVFRPQ*

>peptide 13 (75 aa)
MDPFLSVVASAFPGRAGILYYKGQAKPEGSYPNRPAGGTRRGPGNHTTAVEKACSLQITRTVGHPRPSSFSMKNK*

>peptide 14 (37 aa)
MGGLSFAYRMYRLGFVSRTKEAFWRARACRKADHYIS*

>peptide 15 (37 aa)
MKWGVFPSPIVCIGLASSPEPRRHSGGRVRVGRPTTT*

Sequence

>CNT30574572
GAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCG
GGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCG
AGACCCCGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGCTTTGAAGAAAAACAAACACGAATCCTCAGCAAAGTGTTCACTTCTTTTTCGCCAGGTTTCA
TTCGATGTGGATTGGATGATGGAAAAACCAGCAAGCTACGGCTTCAAAGCTTACCTTATTATTATAAGAATGGGAAAGGGCTTTTTTTATAGATTCAGAG
GTGAGTAAGGGGGGCGGAGCTTGAAGAGCGAAGCGAGCCGCGCTAGCCTATTACGTTTTTCAGCAGCAAGCTACGGTCTAACGACCCCCTAACAACGGTT
GGGGCGAAAACTCCGGTTCCAAACCTTTCTAAAATTCGAATAATAAGGGGAAAGGGCTTTTTTTATAGATTCAGAGGTGAGTAAGGGGGGCGGAGCTATG
AAGCATCTTAGAGTATTCCATTCCGTTTTTCAGCTGGATCCGGGCCTTGCTATTGTTCGGCCTGAAACAACTGTATTTAGTAGAGAGAGAGGGGCTTTTT
GCGAAAGGCTATCAACGTAAACGTATATCGATATAGTGAGTGTGCGTGCAGGGTGTAGGTGTACCACTTACGAGAAAGAACCCCAAGTCAATAAAGTAGT
TAACCAAACAAAAGTAAGTAGTTCGTCATCTTCCGACGCCTCCCGTTCATTCTTCTTCATTTCATCATGTTTGTTGCCGTTCATAGGTCCCAAGCCCCTC
TTAGAAAGCCCTCCTCCCTCTCCAAAAGTAAAAAAAAAGAAGAATGCTGCTTGATTGAACGAAGATTGTAATAACCTTTCTAACTGACACCCCAGTCATA
ATGCCACCCACGTCTTTTTTTTTTTTTCTTTTGAACAGGCCAACATTTTTTGTCCTTTTGACATAATAACTGGCAGGTTTCATTAATGAAAAGAAGGAGG
CCCGCCATCTGCTAGCATTGTGGTTTGGAATCGATTCTTTATCAATGGCCCACCCTTTCTTTGAACCTTGTCAATGATCGAACTTAAAGATATGAACTGA
GTGCCATTTGATGAGTAACTGAGAACAAGGGAGAGGGATATAGAAAGGATGAAGTAATGAAAGAGGAAGTCATTGCTAGTAGTAACGACTTGTCACGATC
CATTGGTTCATATAGAATCCATGTCCTAGGTGTATCAAAAAACATTCTTTTCGCGAAGCGTATATAATAAAATAGAGTGAAAGGGTCCACCCCGAATCCA
AGGGGGTACTAACTAACAGCTGAGTCCTCTCCGAACCGCAGGAGATAGTTGCCCATCATACGGCTCACCAACTTCACTTGCCTCTATGGGGGGCTCACTC
CGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGGTTGGGTTAGGAGCGTTTTCAATATTCTTCTTTTCCAGAAATGCGAGACGAAA
AAGGAACCCTCGACTGGGAAATGCGAGTCTGTTTTGTCCACTTTCTCCATCCCCCTCTATCAAAATGATCAAAAAGGAAGGCGAGCTTGCTTCTTATTCC
CGTGTTCGATCTCTTCCATCTCTGCCCTGCTCGTTGTCACCTATGTTGAAGAAAGGTTTGGAACCCTGTAGAGAATGAAGAGGGGCCAAGGATCTTCCTC
TCAACAGTGCTTCTCGAGGCTCCACTCTCCCCCCTGAATAAGGAAGGCCCCGTTAGCCTGGGCGAAGATGGGGATAAGGAGTAAGGATTGAAGCCCCCTT
AGCTCTGCCAGGCACTGGACAGGGGTTAGCTCTGTAAATGTGTAGAGCCAAGTGTAGTGTGGTGTAGTAGTAGGCACTTCTAGGCCCCTTCCCGGCTACT
GGATCACTCCAGTGCTTTGGGTACTACGGACCCTCTGCCATCCATTGCAGCAGAGCCGTTTCATGAGCGGGGGGGCTAAGCGCAGTTCTTTGAATCAAAC
GTTGAATGAAATCTATTGTTTTTTAGATATCAAAATCTAAATCGGATAGGATAGATGGATGGATCTATCTTTCTATTCATATATATTACTAAAGAAAATG
GATTTATATAGTTAAGTAGCGTAGCAAGAAGCCCCAAATCCTTGATTTGGCCAGGAAAGACTGCACTGCTTTGGGCCCAGGAAGCGAAGGGAATGAGCCC
TACTGATCTACGACCACCCTCCACACTTCTTTCTTTTTTTCCGTGCCCGTTCCGCATGCGCTTCGCGCGCCATTGGCGCTTTGCTCTCCTCTTATTCTTC
ATTGGACGGTTCGGATGGACTTCGCCGTTCTTTCCCAACTCAAATAGAAAAGGCTGTATCACATCGAGATGCCGATTCGTTTTCCGCCCCCAATGAGATG
GGGAATTTTTAACCCCCTATTTATACTTTTTGGCCCTTCATCTTTCTGAATCGGGGCCCGGCCCGGCTCGCGTCGTTCCAACAACCGGCGGGGAGCACCT
CAGTATACGATCGCGCGCAGTAACTGGGAGTCCTATTACACCTAAGGCCAACTTCAATTCACCAAACCAAGGTTCATCTCGTGTAGTGATTGTGGACTCG
TACAAGGATATTGAGTAGACGGTTGATGTATCAGACTCGACCCTATCTTTCGTAGCATGCATTCCCATCCGTGTCGCAACTGATTCGGTAAGCTACGTGT
CCGGTGCACGGAGAACTGCCCTGCCTCCGGTCCCCCAAAATGACTCGTGGCAACCTTCCGGCCGCCCAACGACCTATAACGCTAGTCACTACTCCCACTG
GGGCTAGGAAGTAAGCCCCACAACCCAAAGCGGCGAAGAACAAATAGAATTTGCTACAAAAGCCGGCTAACGGGGGTATTCCTGCGTATGAGAACATAGT
AATGGAGAAGGTAATAGCCGAAATAGGATTCGTTTTGGCTAGAGCGCCCAAATCCGCTATATATTTGACACGGGTTTGCCGTAATGCTAAAACTATGGCG
AATGCATCTATCGTCATTGATGCATAAATAAAGATACCAATTAGTAGTGATTGAATTCCTTCTATGGTTCCACATGATAAACCAGTACGAATATAACCTA
CATGTCCAATTGAACTATGAGCTAGAGGTCTTTTTACTTTCGTTTGGGCCATGGCGGCCAGTGCTCCTAAGATCATAGAAGCAATGCTGCAGAAAAAGAA
GATTTGTTGCAATGTAGCTCCATAGGAACCATAAATAGAAACACGTGAAATATTAGCAGAAATAGAGATTTTAGGCGCAATAGAAAGGAATGCTGTAACC
GGGGTGGGTGAACCCTCATAGATATCAGGTGCCCACATATATAGAGTCAAAAGAGATATGGAGTCCGAAGGGGAGGGGGCTTTTCTTCGGGGCTCGAGAG
ATGGAATAGATAGGGCCCCACAAGTTTTTAATTCGTCGCTGTAGAATTCACACGAAAGGGAACGAGGAATTCTCAACGAAAAAAGTGCTCTCTGAACCGA
ACGTGAAAGTCGTTTTCCATCAGACGGCTGTTCCCGTAACTCCACTCTCGACTTGGATTATATATCCAAAAAGGTCCGCTCTCGGCCATTCCACACGCTG
CCTAGCAGAGGCGTGGTTATCTGAAGTGGATTCTCTCTTTTATAGTAGATGCCGAACCTGCTGCCCCATTGACTAAGAAGGGGGCGGGCGCAGCAGCTAC
ATGGACCCCTTCCTTTCTGTTGTTGCCAGCGCTTTCCCGGGCCGAGCCGGAATTCTTTATTATAAAGGGCAGGCAAAGCCCGAAGGCAGCTATCCCAATA
GGCCAGCGGGCGGAACGAGGAGAGGGCCCGGCAATCATACCACCGCGGTCGAAAAAGCGTGTTCCCTTCAGATAACACGCACCGTAGGCCATCCTCGGCC
TTCTTCGTTTTCGATGAAAAACAAATAAAATGATCTACGACCACTTCTTATCAAAGATCAGCCTGCCTAAGATCGTAGGGGAGCACCCTGATCGTTCCGA
CCAGCTTGCCTAAGATCGTAGGGGAGCACCCTGATCGTTCCGACCAGCCTGATCGTAGATCACCCTCATCACTTCAATGAAAGCGCAAACCAATTTATTT
CTTAGTCACCGGGCGGAGCGCACCTTTGGTACTTCAGTAGGGCGAGCTGTTTGATAGTGACTTCTTTCGTTTGGTAGGGCGACGAAAGGCTACTTCAATC
TAGGAAACAGCCGGAAACTCGAGAAACTTTGGAAGCGTTCGCCGGGCGTCATTCCTTCCTTTTGATTATGTCGTGACGCTGACTGAATCCAATCCATAAA
CCCGGAAACGAAACTAAGTTCGTTCCCTTTCGTCAAGTAGGTAAAGTAGGCATACGAACCACTTTAGCTTTGCCTTAGACTCTATTGGAACAAAGCAAAG
AAGGAGGCGGAATGGAGAAAGGAAAGGGACAAGGGCGGTCTTGCTTGGCGCGAAGGCTGCTGGTTCGAGGGTAGGGTACGGTACTAAAGGTCCTCGGACT
TCCAGGCGGTTTTTCTTTTGGGCAGCTGTTCACCGTTGGATCTCGCCAATACAGCCCCCTATAGTTTTCGTTACCGAGATATCTTTTTTTTTCATTGTTC
CCAGGGATTTTTTGGGTAATCCGCTCCCATGCTGCAAACAGTCAAATCTGAACTGAACCTTGTCGCTCTTCTTTCCTCGCGGGCAGGAAGCACACCAGCA
GCGTGCGTTGCGTGATTCTACTGTGTTTTTTGCACTTGACTGGGTGGACAGTTGACCGGAAGAGAACTTCGATTCGCCCGGCCAGCAGGCGGGCGGCGTG
CTTATCTTGTGTGACAACACTACAGAGCGAGTGGCTCTTCTAGGCGGGCAGCTGTGTGACAACACTACAGAGAAAGCGGCGCTTTCGTGTAACATGCTAT
GGTCTCAACGCCCTTACGAGGTAGTGATGAGTTTCACGCGCTCTAAGCCCGGCCCGCGCGCGGTTAGGAAGATTGGCCGCAATCTGAGCGGTACCACCCA
CCCTACCCTACCACCTATAGGCGGCCGTCCGTCCTACAGCCGCCCGAAAAGGAACTGCAGTGATCTTGAATAGGAATCCTACAGCGATAGAGAGAATCCC
CATAAAAAGACCACTAGATCGAGCACCAGTGATTTCGTATCCGGTCAAAATCTTGGCTAATTGATCGAAGTGGGTAGCTCCAGTAGACCCATAGATCATG
GAACAAATAGGGTGGGTAGGCCCAACTCCCACACTATACGTATAGACGCGAACCCCCCTCGTTACCGTACGTGCGACTCTCACCGCATACGGCTCGCACA
AAGACTCCTAAATCCATCCCGTTCCTGATCTTCGACCACCCTCTCCTCTCCAATCAATCCTCGATCAAACTTGCGTTCCCCAGGCGCTATGAAATGGGGG
GTCTTTCCTTCGCCTATCGTATGTATCGGCTTGGCTTCGTCTCCAGAACCAAGGAGGCATTCTGGCGGGCGCGTGCGTGTAGGAAGGCCGACCACTACAT
AAGCTAAAAGACTACGACTACAAGCCAAGCCGGAAGCGACTTGCTTCTATTCTCGTTGGGATTGGATATAGATAGATGGGGAATCTATAGATCGTAGTAG
TTCGCCAACCTCTCTAACTAACATACGATACAATTGAACTTCACGGCACGGCCAAAAAAAAAGAAAGAGCTTCGCTCGGTTGGCCTTCCTACGCTGACGA
ATGCCTCCTTTCTCTTCTCTGAAGTCTACAACAAACAAGTGGGAGAGGCAGGATTCGAACCTACGTAGAAAAACTTCAACAGATTTACAGTCTGTCGCTT
TTGACCACTCGGCCACTCTCCCCTTCCCGGGCCGAGGCCCCCCTCAATAGGTTCTAAGAAGGAGGGCGTTAAGCACCTGAATAAAAAATAAAAAAGCTTA
TTGATTTGATTGAAGGGAACTAAGACTATTTATTAGCTTAGCTAGCGTTCCGGGAGAATCTAGTCATTTAGTCAGTTCATAACAATCTCTGTAAAGCAAG
GGGCAAAGCTTCTACGACAGCTTCCCCCTCATGTAGTCGTCGGCCTTCCCCAGCCCCCCCCTTCGTCGCTTCTGGCTAAGCATCTTTCGGCGGAGGAAAG
GAGGCGACTAGTAGCTTCTGGCGAAGCTGCGAGTTCATAAGCAAGTGAATGAACGAGCCAGCGAGCTGCGAGTGAAGTGACTGAACGAGCCATGTTCCTA
AAAGGAGTGACCATCCTTGTTTTCTTCCCTTCCCCTATCCCTTCAAAGCCCATAGGTTGGGCGCTAGCGCTTTACTAATATAATAGAAAGTCAGGCTCTT
CTGCTGAGCGAAGCTGCGAGCCTACCCTTCTCGAGCCTACTTAAATTACGCTTACCAAGCCTAGTCTACTAAAATAGGGCTACAGCAAGCAAGCTTTCCC
CCTTCCTTCGTTTGTTGTGGGTCGCGCCTCACCGCAGGCACTGAATGAATGAAATGAGTGGAGATCTTCCTTCCCCCTTGTTAATTACCAAGAACTTCGT
TGCCACTAGTGGCGAAGAAAAATTAGACCATCCCACCCAAAAACAACTCGGAGCCTAAAGAGAGTTCAGTCTACAAGAAGCTGGCAGAGCTTTAGCCATT
GGACTACATCCATCTATCCTACCTAAACAGTAAC