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Detailed information on CNT30574571


BLAST search results

BLAST vs Swiss-Prot:
sp|P08977|RT13_MAIZE, E-value = 4e-60

BLAST vs NONCODE:
NONMTRT002185, E-value = 7e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678383Vitis viniferaSetaria viridis1.6930.4193.27104reverse complement
CNT30523685Vitis viniferaSetaria italica4.0869.7287.65251forward
CNT30549210Vitis viniferaIpomoea triloba12.4364.7289.28765forward
CNT30501657Vitis viniferaCoffea canephora24.6230.8292.611515forward
CNT30269710Vitis viniferaChenopodium quinoa2.2933.5795.74141forward
CNT3098190Vitis viniferaSolanum tuberosum4.8657.7295.65299forward
CNT30187493Vitis viniferaSecale cereale3.0941.8596.32190forward
CNT30220028Vitis viniferaHordeum vulgare6.0627.7190.88373forward
CNT30401101Vitis viniferaTriticum turgidum4.9424.9893.75304forward
CNT30592607Vitis viniferaMusa acuminata1.4520.9992.1389forward
CNT30437037Vitis viniferaAegilops tauschii3.155.295.81191forward
CNT30664530Vitis viniferaTriticum dicoccoides468.7291.87246forward
CNT30598800Vitis viniferaFraxinus excelsior3.1451.8898.96193forward
CNT3016498Vitis viniferaZea mays2.3732.395.21146forward
CNT30228621Vitis viniferaAnanas comosus6.2492.3190.36384reverse complement
CNT30207841Vitis viniferaHelianthus annuus16.5337.9686.231017forward
CNT30680154Vitis viniferaTriticum urartu5.1791.1292.45318forward
CNT30480890Vitis viniferaArabidopsis halleri2.6849.5598.18165forward
CNT30354619Vitis viniferaLactuca sativa7.1226.2997.03438forward
CNT30154718Vitis viniferaPrunus persica2.2920.3597.16141reverse complement
CNT3056169Vitis viniferaAmborella trichopoda4.7179.6791.72290forward
CNT30100050Vitis viniferaOryza rufipogon5.8782.0593.91361reverse complement
CNT30495778Vitis viniferaDigitaria exilis6.0689.2390.88373forward
CNT30175599Vitis viniferaVigna angularis19.1572.9988.371178reverse complement
CNT30557320Vitis viniferaPanicum hallii4.0656.3191.6250forward
CNT30335348Vitis viniferaCynara cardunculus3.5460.2293.58218forward
CNT30725731Vitis viniferaLupinus angustifolius5.8824.1894.2362reverse complement

Expression of CNT30574571

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKTGGIVVCSTLVALVYIPDYSYGRSVTQPT*

>peptide 2 (33 aa)
MMLGSAGSSSESENKAETERIVSVTYLIRLNKI*

>peptide 3 (31 aa)
MWAEPFPSQVVARPGREEIHIETTAIREYLS*

>peptide 4 (42 aa)
SFLCFDCWNFTHARNYARLKEVFAFFPPNYLPKVRMPRLSFY*

>peptide 5 (42 aa)
MKGQGKPQESIGWLPAPSRPASSSRGGGVLERTTHCCVAPIW*

>peptide 6 (39 aa)
MQARPFRAYSPSSVRWRQGRRHWKERLDHTKVKRHSGSD*

>peptide 7 (37 aa)
MAFLGPIPSIFVEAILTCSSATDLAPEIYDILDPSFY*

>peptide 8 (36 aa)
MFDFSCPCLYPGLLLWPICHPTYLNNLKAWPLPFGE*

>peptide 9 (33 aa)
MLAPHESPYKKAKKALISQLGPFPIQLCRLLRE*

>peptide 10 (32 aa)
MWLVRAFRGATCDSAWEKGAELHTCVFRALSE*

>peptide 11 (70 aa)
MTFLILPFTSLLGWNHKWVVSSLMIFSIGRTTVSGLNFDPYFFQLCYRTQALKKHQEWRIIYLTLISLLK*

>peptide 12 (62 aa)
MRNITNTGNKGIPDHICFCAMTISLELRGPTHISTVYRGPRPEPHVQVSLHVARPCFPRRYL*

>peptide 13 (46 aa)
MGEGGGTAHLRVQSIVRVSRQRLPSKQSFFLKRLGWFLFGARLLFR*

>peptide 14 (47 aa)
MLSYPSPEKTSRVEDNLFNTYLTFEVIKCGSRSRKFFAFLKIAQKVF*

>peptide 15 (63 aa)
MVLASLSPPSLEFVHSLGDPLLSRSSVCSSFRPVSEISAHCSHLRGSSHLDSTRTLVPRPLIR*

>peptide 16 (49 aa)
MAFSERGSLLQAPPNLYKVLLAFSQPLVAYVVVGIPTCSSLPPYLRIQR*

>peptide 17 (52 aa)
MEAGGLLEVRPGFFWCRRGGIDLSNAYSVVPAWPHGFVFDRSIKQRNPVLLD*

>peptide 18 (49 aa)
MLRFPPVRPRVGLGEHPSDCLRGSKRAHKAHNKNKTNRDFIRDHLSCRS*

>peptide 19 (49 aa)
MNRTSTSSVTPHRAYGSIPQPNLLWPRVLPFYSSVSGPWEHGGAVSAFD*

Sequence

>CNT30574571
CATCTTTCCTTTGCTTTGATTGCTGGAACTTTACACATGCGCGGAACTATGCTCGATTAAAGGAGGTCTTTGCTTTTTTCCCTCCTAACTATCTTCCTAA
GGTAAGAATGCCTAGACTATCTTTTTACTAAGGATATAGGTATGGTTTAAAGTCTATTCACTTTTGGCCTTATACACAGCTCTCTGCAAATAACAAAAGG
GAAAGTGGGGATCCCCCTTGCCGTATCCCGAGCGAACTTCTGATAAACCATTGCAAGAAGGTAAATACATCTGGCAGCAAGGAAGATTGTGAACCCCAAC
GGAACGGGCATTTTCGGGGACTAGCCCGCTTCCCATTACTAAAGAGGGCAATTCCTCGCACATAATTAAGGGAGCCATTGAAAGGTGACTAAAAGACCAG
AAACGGGGACTACCCGAGCTAATGATAGAGGCAAGAACACTTTCCGGCCGGGCCTTACTATAACCAACCTCACAGATCCCACTCAATCTTTTACACCGAT
GTATCGTACTCTCTCGACCAGGTCATCATAAGAAAATGCTGCTAAATCTTTCCGAAGTGAGAGAAGGAGGGAAGGCGCGCTACAACTAACATAACAGCCA
GCTGAAAAACGTTAGCTAGCTAGGCTAGCGCGCAATGGCTTTCTCTGAGAGGGGCTCGCTTCTTCAAGCTCCGCCCAACCTATACAAGGTGCTGCTCGCT
TTCTCTCAGCCACTAGTGGCTTATGTAGTGGTCGGCATTCCTACGTGCTCCTCCTTGCCCCCCTACTTAAGAATCCAAAGGTGACCCTTAAAAAAGGATG
TTGTCGTGACGCTTTGGTTACGAAGGTTACCGGGGTCTAGGTTTATGGATGGATTCAGTCAGCGAAAGTCCCTCAAACTCAATCAATATTAACAATATGT
CGTGACCGGGGTTTATTTTGTCAGAAAAGAAAGTAGGTTTCGGGGGTTCATTGATTAGTACACCTCCGGTGCTGGTAAGGTCGGGACTGTGGTCGTCCGT
CTCCGGTTTGCCGGCCGATAAGATCTCTGAGATTGACCAGCCAGCTGGGTTGGTTTGGCTATTCCTTTCTATCTATTGAAAAGGAGTCCGCTGTCTGCGC
GAGTCACCTTCTTCTAGGCTCCGAGTCACCTTCTTCTAGGCTCCGCTGGACGACACGGCATTCTCGTTCAAATATAGGCCGGCCGTACTTGTGATGGTTC
CCAAGGATCCAATATGACCACTTAGGTCTACGTTGCCACGATATTGTTTTATGGAAGCGGGCGGGCTGTTAGAAGTTCGGCCCGGTTTTTTTTGGTGTCG
TAGGGGAGGGATTGACCTTTCTAACGCATATTCAGTCGTACCGGCATGGCCCCACGGATTTGTTTTCGATCGGAGCATCAAGCAGCGCAACCCGGTTCTA
CTTGACTAAGCCCCGTGCTCGTCCAAGGAGGGAGTTTGCTTTACCCAACCCCCTTTTTGATAACAAGGCAGAAAGCCCCGACCCGACATTCATGAGTTTC
GAATGAAGAATTAAGAGTGCCCCGCCCCAGCAAGCGCCTACTCCTATCAAAATGAAAAGCGTGACTTTACTAAACAAGCAAAAAAAGCCCTATATATTAT
ATTAGTAAAGCGCTAACGCGCGCCCCTGCAATCAAACTCAAGGAAAGCCCTGATCGATACCTTTTGACAACCTTACTAAGGGGAAAAATGCGCTCAAACA
ACCTATCTTACTAATAATAATGAAGGGCCTGATCGTAGACCACCCTATCGTTGTAAAGCTACAGCTCGAAAGCCGGCCTTACCTTCTTTAGTAAAGGTTT
AGTAAAGGGCGTTTAGGTTGGTCGTAGATCTTAAGCAGGCTGATCGTAGATCAGCTTTTTTTTTATCCGAGAGGGTAATATATAGGGCTTTTCTCGCTTG
TTGCTTTCTTCGCATGCTTGAGCGCATCTTTCTCATACATATATCAAAAGGCTTTCCTTGGGTTTTCAATAAGGGGCCGCCCTATCTATAGTAAGGGGCC
TTTTCAATAGGGCTCGCGCGAGGCGCTCACGTTTTTTGGCTTCCCTAAAATCGAATATTTTGAAGTTGGTAAAGACCCACACCTCTTGTTTCAGTCAGAA
TGAGTCCCCGAGACCCCGGGACATTGGCTTCCGCCAACAGTGAACTATTAAGGATCGCATCCCGCGCATATTCTACATTATAGCCTGCAACTGATTCAGC
TTCCGCTTCTGGGAGATCAAACGGAGCTCGATTAGTTTCTGCTAGACGAGAAATGAGGAACATAACCAATACAGGGAACAAGGGAATACCGGACCATATC
TGCTTTTGCGCCATGACAATCTCACTCGAATTACGGGGACCTACACATATTAGTACAGTATACCGGGGTCCCCGGCCAGAACCACACGTGCAAGTTTCCC
TGCATGTGGCTCGTCCGTGCTTTCCGAGGCGCTACCTGTGACTCAGCATGGGAGAAGGGGGCGGAACTGCACACTTGCGTGTTCAGAGCATTGTCCGAGT
GAGTAGGCAGCGCCTACCAAGCAAACAAAGCTTTTTCTTGAAGAGGCTGGGCTGGTTCCTTTTCGGCGCCCGCCTTTTATTTAGATGAAGGGGCAAGGCA
AGCCCCAGGAAAGTATAGGTTGGCTCCCAGCTCCATCTCGGCCGGCATCCAGCTCTCGAGGGGGTGGGGTCCTGGAGCGAACTACTCATTGCTGTGTTGC
CCCAATCTGGTGAGGAGCATTGTTTTGAGGGAGGGAAAGCGTGGTTGACAAGCCACTTCGAGGAGGCGACTGGACTGGAGTGCTTTCATCAAATGATGCA
TGTGGGCTGAGCCATTCCCATCCCAAGTGGTGGCCCGGCCTGGTCGGGAAGAGATTCACATAGAGACTACTGCTATCCGGGAATATCTTTCTTAGCTAGC
GGGGGCGGGCTTTCCTATGGTAGTCCCGCTGCGGCCTCTGACCGCACCAATAGCTCCCGTCTCATCTTTCTTTGGCTATACTTGTATGTAGCCCGCCATG
TTAGCTCCACATGAGAGCCCTTATAAAAAGGCTAAAAAGGCACTCATCAGTCAGCTCGGCCCCTTTCCTATTCAGCTTTGCCGCCTATTAAGAGAATAGG
TCCCGTTCAAGCGGCCCGCCTTTATTCATCTATACCAGCTGCCACGCACGGCCCAATAGGAACGATTTCAGCGCCCCTCTCTAGATAAGAAGCAGAACGC
GCCATCACCTACAGCCCTTTCCTCTGCCGGGGACTTCCACGAAATGAAATGAAAACGGGCGGCATCGTCGTATGTTCGACTTTAGTTGCCCTTGTTTATA
TCCCGGACTACTCCTATGGCCGATCTGTCACCCAACCTACTTAAACAACCTAAAGGCTTGGCCCCTCCCGTTTGGAGAATGAGCCCTTATGGCACGGCTT
AGTCAGTTATTCTCGCAGTTCAGATAAGATTCGGACCGCCACTTCTCTGAAAGCATGGTTCTTGCCTCCCTCTCTCCTCCCTCTTTGGAGTTCGTCCATT
CGTTGGGTGATCCCTTGCTCTCACGTTCGAGTGTTTGCTCGTCGTTTAGGCCGGTGAGTGAGATTTCTGCTCATTGCAGTCACCTCCGGGGTTCTTCGCA
CCTGGATAGTACCAGGACCCTTGTGCCCCGGCCCTTGATCAGATAAAGCTGCCCGCCCGAAGCCCGCCCTATGACCCACAACTCAAAATGAGCCTTGCGA
CGAGACGCGGACATTCCCCATGCTGCGGTTCCCTCCGGTCCGTCCCCGGGTTGGGTTAGGGGAACATCCGAGCGATTGCCTTCGCGGATCCAAACGCGCT
CACAAGGCGCACAATAAGAATAAGACCAATAGAGACTTCATAAGGGACCATTTGAGCTGCAGATCGTAATGCTCCTAGAAAGGCATATTTAGAATATAGA
GGAGTGAAAGTTCCCAACAATCAACGAGTGGATCATACCCTTCTATGAACCGTACGAGCACGTCCTCTGTCACCCCCCACCGCGCTTACGGCTCTATACC
CCAACCCAACTTGCTCTGGCCCCGGGTCCTCCCTTTCTATTCCTCGGTAAGCGGACCGTGGGAGCATGGGGGGGCGGTATCTGCTTTTGACTGATAGAAA
GCATCTCTCTTTTGTCCCTCCTGACCGAACCCGCCAAAAAAATCACAATTAAAATAGTAGTTCTTGCCGGCGTCGGAGACATCTTTCTCTGAGGAGGAGG
CTTCGTCGTCCAGCTCCTCATAAATGATGTTAGGATCGGCCGGCTCATCCTCGGAATCCGAAAATAAAGCAGAGACAGAACGGATTGTTTCAGTGACATA
TCTAATCAGACTGAATAAGATTTGAAGAGCTGTCACGATCATTCACATCAATTTCAGCAGGCAGGAAGGGCGCGGAAGCTACCGTTTCTAGAATGCAAGC
AAGGCCGTTTAGGGCTTACTCTCCTAGTAGCGTACGTTGGCGGCAAGGAAGGAGGCATTGGAAAGAAAGACTAGACCATACTAAAGTAAAGAGGCATTCG
GGAAGCGACTAGTCGCTTCTGGCGAAGCTTCTAGAAGGCCGACCACTACATAGAGAGATCCATATACCAGTCATGAGCGATAGCGAAGCCTAGAGAGGCG
GAAGCAGTAGCTTCTAGGACGAAGCCGAGCCGATACGATAGGCGGGCGAAGGGAGCGAGACCAAGCCGAGCCACTAGTGGAGTGGCGAAGGAGGCCTACT
ATACGTATACTGGATTAGTAACCGGTGAAATACCAAAAAAAAGTAAAAAAAATGTCAGTGAACTATTGAAGCTATCAGTGTGATTGATCAGACAAGTACC
AAGGGCTTTCGGTAGACTTCTTTCATTTCCGAATTCGTTTGCGACAAGTCCTAGCATTAGTATGAGTTCGTTGACCGCGTAAGGGCGATCCATCTTGATG
ACAAATTCCACGATAACGAGAAATAGAAATTAATCGTTCGATGTCTGCTCGTTCTCCCCTCTTCAATTCCCAATGAACAACATGATCTTGACCTATCATT
TGTTCAATTTGGTCGATCTGATACTTAGTTAACTCTTTGATCTTTATGTTCCCACTGATACCTAATCGATAACGAACCTGAATGGCTTTTTTAGGTCCAA
TTCCATCCATTTTTGTTGAGGCAATTCTTACTTGTTCATCGGCAACTGATCTAGCTCCTGAAATATATGACATTCTTGATCCTTCCTTTTACTAGTCTTC
TCGGCTGGAATCATAAATGGGTTGTCTCCTCTCTGATGATCTTTTCTATAGGTAGAACTACTGTGAGCGGTCTAAACTTCGACCCTTATTTCTTCCAATT
ATGTTATCGTACCCAAGCCCTGAAAAAACATCAAGAGTGGAGGATAATTTATTTAACACTTATCTCACTTTTGAAGTGATAAAGTGCGGGTCGCGGTCTC
GGAAGTTTTTCGCCTTTCTTAAGATAGCGCAGAAGGTCTTTTAGGGCCACTATGCTCGCATCCCCCGACTCATAATCGAAGTGGTCTCGTGCGATCTCAT
GCGCGGCCATCATTAAGTCGGGTCTGGGCTGCCTGCGGTTACAGAATCGCCCGCAGAAGCCCCCTCGACTCTCTCTCTATAAAAAAAAGCTTTCTGGCGG
CGCTGGCGCAGGTTTTTCTTCCTTCTGCCCAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATC
AAACTCTTCTTTTGACTATGATTGGGCCCTGCAGTGGTAGAACCTGGTGAACCGGGCGTACTACTGAACATTGATTCTCTCTCCTGAGCCCTCTCTTATA
TATATTATTATATATATATAATACCAACTCGATCAAAGAAAACTACAAGCAACTACATCAACAACCCGGGCCAATTAACCGGCCCGTCCTACCTACTATC
GCTAATAAGGGCGTTTAGGGTGGTCGTAGATCAGCTAGTCGAGCAAGCAGCGCGACCCCCGGTTCTACTTCACTAAGCCCCGTGCTTGTACAAGGAGGAA
GCCAATCCCACCAACTTTCATCACCTTTTTTTAGTATGCCTTTTGCTTTGAACACGGACGAAGGAGCTCAACAAACGTGACCGGGCTGCTCATGAGAGAA
TTTCTAAAACAAAAACAAGACCTCTTTCTTTCTTCTTTCTCAAAACACCTTGA