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Detailed information on CNT30574570


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019944Vitis viniferaCitrullus lanatus57.6648.5891.97685reverse complement
CNT30197585Vitis viniferaPisum sativum6.1428.7486.373reverse complement
CNT30592670Vitis viniferaMusa acuminata6.1420.6810073forward
CNT30608564Vitis viniferaGossypium raimondii6.1421.4787.6773reverse complement
CNT30228106Vitis viniferaAnanas comosus39.31107.8581.8467reverse complement
CNT30624631Vitis viniferaDaucus carota9.3454.1595.5111reverse complement
CNT30358835Vitis viniferaLactuca sativa26.2614.7296.47312forward

Expression of CNT30574570

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MNSPLSTSIHVGEKERKICIQHFMSFTGPLKSPKKGEKWGYK*

>peptide 2 (45 aa)
MTCIVVGLKTSIPTIPECLLSSARSFARSKQDEVALLRRQGSFRT*

>peptide 3 (41 aa)
ARPVTRDSRLLHFLMLAMYSGQIGFFSSQDLLLFFILRELE*

Sequence

>CNT30574570
GGCTCGGCCAGTTACTCGGGATTCCCGATTATTACATTTTCTGATGTTAGCAATGTATAGTGGTCAAATAGGATTTTTTTCTTCTCAAGATCTTTTACTT
TTTTTCATCCTGCGGGAGTTAGAATGAATTCCCCTTTATCTACTTCTATCCATGTAGGGGAGAAAGAAAGAAAGATCTGTATTCAGCATTTTATGAGCTT
TACAGGCCCGTTGAAGTCCCCGAAAAAAGGGGAAAAATGGGGCTATAAGTAGGCCGTTTGCTATTGCTATAAGGGCTGCTCGCCTTTATACGGCTTGGCT
TCGCTATCGCTCATGACTTGTATTGTGGTCGGCCTAAAGACTAGTATTCCTACCATACCAGAATGCCTATTATCTAGTGCTAGAAGCTTCGCCAGAAGCA
AGCAAGACGAGGTCGCTCTGCTTCGTAGACAAGGCTCGTTCCGTACTTGACTTACGAGCTCGTGTAGTACTCGCCCCTCTCTCTAAAGGGGCTTATGCAC
TCCACTCGCTGTCTACTAAACGAGCGTTAGAGCGAGCGAGCGAAGCCTTCAATTTAGTGGCTTCCCCCCTTTTCCCTCACCCTACTCTTTCATTTCCGCT
TAAGCTTCCCCGGTTTGGTTGGTTTGGGGGATTAATTGATTGGATACCCGAGAACCATAATCTTTCCTAGGAACAGCTTCTACGACGATAGATAGGGGTC
AGGTTTGTTTGGCATCTATGCCCCCTGCCCTCCAAACAGTATGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGATCTTCACGGCACCTCCTCCACC
ATAGTGTGAGCTGGGAGCAGCTCCGAAAAGCGAGGCCTACTTTAAAATTAGCTTTCAACAACGTCAACAACACCACGAAAAAAGTAAACTATGGTTGCCC
ACTGATCTGATCATAGGTGAAATCCAATCCCTTCGCTTCGCGCCAGGCTTGGAAACCGTAAGTCAGGCTCCCTTCGCCTCTCGGAAGCGAGAAAGCGAGC
AGCCCTCTGAAGATCTACGAGCAACCTGATTTACAATCAGCCTGCCTAAGATCGTAGGGGAGCACCCTGATCGTTCCGACCACTTCTGATCAAAGATCAG
CCTGATCTACGACCACCCTGATCGTAGAGCACTTCTGATCTTCAATCAGCCTGCCTAAGATCCACCCTGATTTACAATCAGCCTGATC