Detailed information on CNT30574469


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550233Vitis viniferaIpomoea triloba78.1250.895.531432forward
CNT30519036Vitis viniferaJuglans regia78.9446.896.341447forward
CNT30619307Vitis viniferaSesamum indicum78.9486.3995.161447forward
CNT30507933Vitis viniferaNicotiana attenuata78.8971.1396.131446forward
CNT30711221Vitis viniferaGlycine max66.1888.897.281213forward
CNT3047210Vitis viniferaPrunus dulcis67.1638.2796.181231forward
CNT30163337Vitis viniferaPistacia vera62.382.5196.061142forward
CNT30540266Vitis viniferaBrassica napus76.2172.5394.771397forward
CNT30311297Vitis viniferaCamelina sativa77.6370.6694.171423forward
CNT3060563Vitis viniferaArabidopsis lyrata77.1464.5495.051414reverse complement
CNT3075807Vitis viniferaBrassica juncea78.2970.5294.361435forward
CNT30217525Vitis viniferaKalanchoe fedtschenkoi78.8980.691.561446forward
CNT30355986Vitis viniferaLactuca sativa78.7852.8991.071444forward
CNT30433931Vitis viniferaPapaver somniferum78.4566.394.511438forward
CNT3023562Vitis viniferaPopulus trichocarpa78.8964.7896.41446reverse complement
CNT30176196Vitis viniferaVigna angularis65.5279.9196.341201reverse complement
CNT30558388Vitis viniferaPanicum hallii64.5485.1794.841183forward

Expression of CNT30574469

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MHLLDKRSTRALPVALMIHDNSTDRTAIVPATHHSNFCPINFRW*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 3 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 4 (72 aa)
MVLTGDGELGAGHGGPSPEPVGCRWTARAAPAARAGRRVPAGGRTGNGSLGGLPRASNSRLRTGTDKGNPTV*

>peptide 5 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIGAYYGIDG*

>peptide 6 (32 aa)
VDPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

Sequence

>CNT30574469
GGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAA
ATCAGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATT
TATTAGATAAAAGGTCGACGCGGGCTTTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAA
TTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACTATGGTATTGACGGGTGACGGAGAATTAGGGGCTGGGCACGGGGGTCCCAGTCCCGAAC
CCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCCTCGGGGGCCT
TCCCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGCTCAC
GCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCA
AATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCT
TGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGGAAACGG
CGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGATCATCCCCTCCTTTTGGACCCAAGGCGCGCCCAGCGCG
CCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACA
GAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTC
GGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTC
GGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTA
GTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCA
GTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTACGCCCGCCGCCCGATTGCCGACCCT
CAGTAGGGGCCACCCGGCCCCCAGAGGCACGTGTCCTTGGTCAAGCCCGCGCGGCGGACGAGCCGCACGGGCCGCCTTGAAGTATCATTCCGACCGAGCG
GCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTATGTC
GCTCCGATTCGTCCCTCCCCCCCACCCCACCCC