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Detailed information on CNT30573937

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30628928	Vitis vinifera	Vigna unguiculata	24.62	32.06	85	160	forward
CNT30489068	Vitis vinifera	Olea europaea	30.77	40.49	85	200	forward
CNT30559586	Vitis vinifera	Actinidia chinensis	46.46	37.42	87.42	302	forward
CNT30508793	Vitis vinifera	Solanum lycopersicum	46.77	78.76	82.24	304	forward
CNT30121164	Vitis vinifera	Citrus clementina	63.08	62.5	82.2	410	forward

Expression of CNT30573937

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MLDCNQERSGYMPERWGCMMERLDYKKVRLGYRKVRWGCKQEKWGCMQEKWGCMRVMLDCSQEK*

>peptide 2 (35 aa)
CNLVMSDCKGLMEIVLDCWENMPVMGCILLRKDYN*

Sequence

>CNT30573937
CTGTAATTTGGTGATGTCGGACTGTAAGGGCTTGATGGAGATAGTCTTGGACTGCTGGGAGAATATGCCAGTGATGGGCTGTATTTTGCTGAGGAAGGAT
TATAACTAGGTGATGTAGGGCTGTAGCTTGGAGAGGTGGGACTGTAGCTAGGAGATGTTGGACTGTAACCAGGAGAGGTCGGGCTATATGCCGGAGAGGT
GGGGCTGTATGATGGAGAGGTTGGACTATAAGAAGGTGAGGTTGGGCTATAGGAAGGTGAGGTGGGGCTGTAAGCAGGAGAAGTGGGGCTGTATGCAGGA
GAAGTGGGGCTGTATGAGGGTGATGTTGGACTGTAGCCAGGAGAAGTAGGGCTATAACCAGGAGATGATGGACTATATCCTGGAGAAGATGGACTGTAAC
CTGGTGACGATGTAGGAGAGAATGCCATGCCCCCAACATAAGGAGAAAATTGTGCATCTGTAATTGGTGACAGACGAAGATTTGGGCTCAGCAAGTAATT
TGGTGACATCATGCCATCATGATATGGAGTACCCGTGATTGGTGAACGGGAAGGTGTCATGCCAAAATCCAAACCTTCCATATAACTTGGGAGCTGAAGT
TCTATAGCATGCTGAAGCATCTGATCATTTAGGTACAGGGCACAATCTCC