Detailed information on CNT3057391


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L3C9|YCF68_SACHY, E-value = 6e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712184Amborella trichopodaGlycine max6.9158.1783.09349forward
CNT30556102Amborella trichopodaOryza glaberrima5.5445.7583.21280forward
CNT30714122Amborella trichopodaMalus domestica golden2.4930.5186.51126forward
CNT30627901Amborella trichopodaDaucus carota7.833.6885.53394forward
CNT30362263Amborella trichopodaSorghum bicolor6.9540.5884.9351forward
CNT30595932Amborella trichopodaOryza meridionalis8.8333.5682.96446forward
CNT30148621Amborella trichopodaBrachypodium distachyon3.3543.5684.02169forward
CNT30575742Amborella trichopodaOryza barthii5.9266.7484.28299forward
CNT30726606Amborella trichopodaLupinus angustifolius6.9729.8684.38352forward

Expression of CNT3057391

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKIVSGHIEPKDRRYALRVQDVYNKTERS*

>peptide 2 (34 aa)
MKINEGTKRGFIVGMDLIGSLIQRFRGGSKGKKV*

>peptide 3 (32 aa)
MPSCEAEGGQGRGWGTWAEEMEDEGRLQPVAM*

>peptide 4 (30 aa)
PSTPAKCLEWMHSWATSAPSKICRSVIKAL*

>peptide 5 (30 aa)
MEPHYLHHVPDLSLALVNAVDSLNPLRGER*

>peptide 6 (40 aa)
MTEDDLQVMRSFVGFSSREAYIICLILYTYTSLNTNFPIS*

>peptide 7 (40 aa)
MYGFSRREEQWSSPQTAQILRVNRELDLYWISPESPHLSS*

>peptide 8 (38 aa)
MGRKSLSWVVPSILGISEIKVALIAICRRVDQAHCSHW*

>peptide 9 (36 aa)
MSSRGSWDRDDSMGHHIVQADLKISMDNRFTRFVAF*

>peptide 10 (45 aa)
MVMCLDDAFMVHIICLDVALLLLKPLHTCTHRYFWCLLMDFSVYI*

>peptide 11 (50 aa)
MGVGRSCAWEESLNRSSSIDEGGKGVCEDADAWSRGGVVDGEGANKVDGK*

>peptide 12 (59 aa)
MKRDVGGCNPKFLTTKGSNVFRPLGKVKSGPLELRRSRTRERGKSRGQCWEGKQERPIR*

>peptide 13 (61 aa)
MGQWSGVGLGREVEWLPWNEDSQSIEIRNLSNLENEGLVAWFDHVNLGLCEGRLGYLGPQN*

>peptide 14 (69 aa)
MGDVVVSPPRIDRFMEEASIEITGLQPLDLRSLVPIDLLFLKDGIVEKLEEILLKKFRVRERSGLFQDI*

>peptide 15 (51 aa)
MVGVILEEEFLSWDQLVTLKSPPMHHIGWGSEATRFNSYQRASLSEFVLGK*

>peptide 16 (77 aa)
AKYSSQVSGMDAFMGHKCPIQDLPVCNKGTLSGRNYKVEDLFQSRSSNFGKDLSGGVNQVDGAKVFELGGPFDLGNK*

Sequence

>CNT3057391
GCCAAGTACTCCAGCCAAGTGTCTGGAATGGATGCATTCATGGGCCACAAGTGCCCCATCCAAGATTTGCCGGTCTGTAATAAAGGCACTTTGAGTGGTA
GAAATTACAAGGTGGAGGACCTCTTTCAGTCGAGAAGCTCAAACTTTGGCAAGGATCTTTCAGGTGGAGTTAACCAGGTTGATGGGGCGAAAGTCTTTGA
GTTGGGTGGTCCCTTCGATCTTGGGAATAAGTGAGATAAAGGTGGCGTTGATAGCCATATGTCGGAGGGTTGATCAAGCACATTGCTCCCATTGGTAAGA
TGGGAGATGTAGTTGTCTCTCCGCCTAGAATTGACCGTTTTATGGAAGAAGCCAGTATTGAGATCACTGGCCTTCAGCCACTTGATCTTAGATCTCTGGT
ACCAATAGATCTCCTCTTTCTTAAGGATGGAATAGTAGAGAAGCTTGAGGAGATCCTTTTGAAGAAGTTCAGAGTCCGAGAGAGGTCTGGACTCTTCCAA
GACATCTAAAGATTGGATTGCCTGTAAGGTCGCAAATTTCTATGGACCAAGGAAGCCTGGTAGTTCCCTGCTCCAATTTTTTAGGGAGATCTTCACTAAT
TGGAGTTTACGTTGGAGTTTAAATCCAGCCCAACCTTCTACTAGATCGGATAGTGCCAGCCACCAATTCGGGAGAAGGTTAAGAAGAGAGGGTTCTTCTA
ACCAGGTCAGTTCAAATCTGAAAGTTTTTTGACCACTGTTAACAAGCTTGGTTTCTAACAGGATGGGACAGTGGTCTGGGGTAGGTTTGGGAAGAGAGGT
AGAATGGCTTCCATGGAATGAGGATTCCCAATCAATAGAGATTAGGAATCTGTCTAATTTGGAGAACGAGGGGTTGGTGGCATGGTTTGACCATGTGAAC
CTAGGTCTTTGCGAGGGTCGACTAGGTTATTTAGGGCCACAAAATTAGAAAGGAGGTCATGGTTGGAGTGATCCTAGAAGAGGAATTCCTTTCGTGGGAC
CAGCTGGTAACATTGAAGTCCCCTCCAATGCACCACATAGGGTGGGGTAGCGAGGCTACGAGGTTTAACTCCTATCAAAGAGCAAGTTTGTCTGAATTTG
TGTTGGGAAAATAGACTGCAAAGAATTTCCAAGAAAGACCATCCGCAATCCTTGTCATCAGGATTGAAATAGAGAATCTCGCCAGGTGGGTGGAATTTAG
GGAGTGGGCTGTGGGATCCCAAATTACCCAGATTCCCCCCGAGGCGCCTTCCGAAGGTTGAGTGGCCCATTGACTAGGTCTGTGCCCCCACACCTGTTGG
ACCAGAGAAAGAGTTGGGATGGGTAGTTTAGTTTCAGTTATGGCCAAAACAGTCGGTTAGTGCCTCGAGCAGAGGTTTCTAACTGCCTGTTTCTTATGGG
TTTGTCCCAGCCCTCTAATATTCCAAGATAAGACTATTATTGGGGGGTAAAAGAGAGAGGGGAGTTCCTAAGGGAACGTCTCACCAGCTAGCCATTGGAG
GATTGATTTTGTAGGGTGGGGGAGAAAGATTGGTGCGAGGTATAAGGTCTGTCATAATTAACTGTGTAGGCCAGGTTGGCCAATTCTCGTGATCCCTTCT
TGCTTATCCGGACTCTAGCCCGCAGGCCAGACTTGAAAAATTCGTAGCAAGGCCCGTCTGGTCCCCCTTGATGGAACCCCATTACCTTCATCACGTCCCG
GATCTCTCCTTGGCCCTTGTCAATGCCGTTGACAGTCTGAATCCACTGAGAGGGGAGAGATAGGGTCCCCCAAAGTGTCAACCAAGAGTAGAGAATCAAA
AGAGTCAGTAGGAGATCGAGCAACAGGGGAGGGAAGCGTAAGTAGAACTGGGAGAGTAGCCGAAGAAGAGGGGTGTAGGTCAGTTGAAGCTTTCAAAGAA
GTGGGAAGCGGCTTAGGAGAAGTGGGTGCCAGATTGATGATGACTGATTCCAGGTGATTGTGTGAAGGTGAGGAAGAAAGGCAAGTGGGCGGTGCAGTAG
TGAAGGCTGCAACTGAAGGCGGAGAAAGAGTTGAAGGTCTGTGGAGACAGAGGTGGAAAGAAAGGCAGGGGGGAGGCAAAGAGGGGAAGGTAGTGGGTAA
AGATAGGTCCTTGGTGAAGGCTGGGAAAAGAGGGGTGGAGAAAGAAGGCGAGAGAAGAGAAGCAAAGGGGTTAAAATAGGGGTGAGGTAGAGAGAGAACA
GGTGGTGGGAAAAGGAAAGGGGACGAGGTGACAAAAGGTGAGATAGAGGCGACCATGATTGAGAGAATGATGGGAGCACCATAGGAGGGGTCGGCCAGGA
AGCCTAGGAGCGCAAGTGGAAGCCCCATTTCTCGGGCGTTCATGGATTCCGTGGACTTCTCGGCAACCGGAGCTTCTAGTTCAAGGGATTTTGGCTGTGA
GAGATGGTGAGGAATCTGGCCTGCTTCCCACTCTGAATGAAGATCAATGAGGGGACGAAGAGAGGGTTTATTGTAGGCATGGATCTCATTGGAAGTCTGA
TCCAACGGTTTAGAGGAGGCAGCAAGGGGAAGAAGGTCTAACATGCAGTGCATGGCTGCGGAGCGAAATGATGAAGGCGGTGAATTTACGAGATAGCAGG
CATTAAGGGTGGAGGTGATGGTAGATAGCGTGTAGGATGGTGTAAGGCCCCTAGGGAGAGGAAGGTGGAGGGATACGGGCAAGGAGCTGAAGAGAATAGG
GAATGAAGGGTGATGGGGCTTGTGGTGAGAGAGAACCTTAGGATGGGAGAATGGGGGTTGGTAGATCGTGTGCATGGGAGGAATCGTTGAACAGGTCGTC
CAGCATCGACGAGGGGGGCAAGGGGGTGTGTGAAGACGCTGATGCATGGTCACGAGGTGGAGTGGTAGACGGCGAGGGTGCGAATAAAGTCGACGGCAAA
TAGGCCCTTTGAGATACAAAGGGCTGACAGTTCGGTGGGACGTACCCGACCCACATGCACTTACGATAGACGCATGTCCTGATGGTCAACTTCTGTAGTT
GCCACTCTTAAGATGCCATCATGCGAAGCAGAAGGCGGTCAAGGCCGAGGGTGGGGGACGTGGGCGGAGGAGATGGAGGATGAGGGAAGACTGCAGCCGG
TGGCAATGTAGGTGACAGGGGTGGTAGAGTGAGTGGTGAGGGGGTGGGTGGTAGAAGGTGAGGCAGTGGTGGTGCTGAGCGCCGGGGGGGGGGACACTGA
GGGATGATGAGCCCTTCGGGGAGGTTGGAAGTTGTTGAATTTGCGGGTCCGACATTTCCAGAACACTAGCGTTCAATGGTTTTGGGCCTCCAGGAAGGAA
GCAGAAGAAGGATGCAGAGGTAATGAAGCCTTCCCAGAGACGGGTGGAGCTACAAAGCGAGGCAAGGGAGGGGAGGTTGTCAACCAGGATATGAAAATAG
TTTCTGGCCACATTGAGCCAAAGGACAGAAGGTATGCTCTAAGGGTCCAGGACGTCTACAATAAGACGGAGAGATCTTAGGGGGTATGCTCTCCATGGAT
TTCAAGTGCACGACGACGAAGGAGCTGCAAGCGTTGCCAATGGATTTGAAGGTGTCAAGGCACCATGAATGAAGAGGGATGTCGGAGGCTGTAACCCAAA
ATTTTTGACGACTAAAGGCTCCAATGTCTTCAGACCACTTGGAAAGGTGAAGAGTGGCCCCCTTGAATTAAGGCGAAGCAGAACTCGTGAGAGAGGAAAG
AGTAGAGGCCAATGTTGGGAAGGAAAACAAGAAAGACCCATTAGATAGGGGACATGTGATGCCCGGTTTCTTCCACAGTTACTTCGCCCATCTCTCGATG
CCTTTGCAGCCGTTACGCTAAGGGTGGAAGATATCGATAAGCGAAGATTTGTACTGCTCGGCGAGATGAGCAGCAGAGGAAGCTGGGATAGGGATGACAG
TATGGGGCACCATATTGTGCAAGCTGATCTAAAGATTTCCATGGACAATAGATTTACCAGATTTGTAGCATTTTAGGAGCTCCAAATCCAATTTTCTATG
ACAGAGGATGATTTGCAAGTAATGAGGAGCTTCGTTGGGTTCTCATCTCGCGAAGCTTATATAATATGCTTAATATTATATACATATACCTCTTTGAATA
CTAATTTCCCTATTAGTTGACATTGATAATGTGTTATGCTTGACAAATCATTGAAGTTCTTTTTTATTTTAGATATTTATCCTTTTATTATGATGGAAGC
GAGAGTTAAAGTTTAGGTTATTTTTAGATCTCATTCTATTATTTCTTGGTTAAGTAGTTATACTTCAAAAATTCTTCTCTTCCAATCTCTTGGTCCCCAC
GGAAAGGTTTCACATTCTTCCTTTCGGGATGGCAAGATTAGGCAAATCTTATTTATTTGTTGCTTTCTCCATACCTCTCGCAAAAGCATGAAAAGAAAAG
AAATGCTCGAATGGTATGGTCCCTTCGTTACCCTAGAATGAAAAGGGTGACCTCATAGTTTTTGGTCTATGAAGGTGCATTCTTAGGTGCTTCATTTTCC
CCATTCAGCCCGAACCTCAACTTGTGCTCGAGAGATAGCTGTCCATACAATGATAAGATGTATGGATTCTCAAGAAGAGAGGAGCAGTGGTCGTCCCCCC
AGACTGCCCAGATCCTACGAGTGAATAGAGAGTTGGATCTATATTGGATCTCACCTGAATCTCCCCATCTATCCTCATGAGAAGAAGTTTGATTTCAAAC
TCCAGCTCGAACGGGAGGAGTACGTCATGGTAATGTGCTTGGATGATGCTTTTATGGTTCATATCATATGCCTTGATGTTGCTTTACTCCTTTTAAAACC
TTTACACACATGCACACATAGATACTTCTGGTGTCTATTAATGGATTTCTCTGTGTATATATAATCATTATAAGAGTGTAAACATGATTTGTAACTTGGA
AACCATGGTTTCTTATTGTCTAAAATTATAGTAATTGATCCTCATGTTTTTTCTTAATCTAAATCCTTAAGAAAGCGATAAAAAGAAAACATGCAGTTTA
TGTTTTTCCTTATTTATATGAAATATCATATTTAACTTGTCTTTATTTACAC