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Detailed information on CNT30573855


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 2e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536082Vitis viniferaEucalyptus grandis96.3597.9780.86580forward
CNT30516792Vitis viniferaJuglans regia93.1963.0381.28561forward
CNT30376704Vitis viniferaArabidopsis thaliana81.7362.4481.71492forward
CNT30616460Vitis viniferaSesamum indicum80.933.9482.96487forward
CNT3021339Vitis viniferaCitrullus lanatus90.786.1280.95546forward
CNT30378927Vitis viniferaManihot esculenta89.787.2481.67540forward
CNT30524942Vitis viniferaPhaseolus vulgaris60.6354.480.82365forward
CNT30490956Vitis viniferaOlea europaea39.756.983.68239forward
CNT30506120Vitis viniferaNicotiana attenuata83.0685.4781500forward
CNT30708121Vitis viniferaGlycine max60.1354.5283.43362forward
CNT3042412Vitis viniferaPrunus dulcis61.6350.0784.64371forward
CNT30591924Vitis viniferaMusa acuminata81.2391.7482489forward
CNT30668234Vitis viniferaTriticum dicoccoides38.0438.9581.66229forward
CNT30312353Vitis viniferaCamelina sativa59.6387.5682.45359forward
CNT3062262Vitis viniferaArabidopsis lyrata78.7486.581.01474forward
CNT3079663Vitis viniferaBrassica juncea72.2681.7781.15435forward
CNT30263540Vitis viniferaBrassica rapa64.1259.8480.57386forward
CNT30605857Vitis viniferaGossypium raimondii93.5269.4281.17563forward
CNT30688162Vitis viniferaTriticum urartu76.4168.4578.91460forward
CNT30476941Vitis viniferaArabidopsis halleri81.7361.4280.49492forward
CNT30366857Vitis viniferaSorghum bicolor69.142.3679.57416forward
CNT30354818Vitis viniferaLactuca sativa47.8455.0781.94288forward
CNT30408809Vitis viniferaPapaver somniferum97.8468.1783.19589forward
CNT30641843Vitis viniferaCannabis sativa78.998.7581.26475forward
CNT3051605Vitis viniferaAmborella trichopoda82.5674.9679.88497forward
CNT30149986Vitis viniferaBrachypodium distachyon78.5752.7378.86473forward

Expression of CNT30573855

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LVMSDCKGLMEIVLDCWENMPVMGCILLRKDYN*

>peptide 2 (78 aa)
MLDCNQERSGYMPERWGCMMERLDYKKVRLGYRMVRSGYRKVRWGCKQEKWGCMQEKWGCMRVMLGCRQEKLDCNLEK*

>peptide 3 (40 aa)
MWGCSWGMWGCSWVRLGSKMDLWENMQDLLDYIQESWDCM*

Sequence

>CNT30573855
TTGGTGATGTCGGACTGTAAGGGCTTGATGGAGATAGTCTTGGACTGCTGGGAGAATATGCCAGTGATGGGCTGTATTTTGCTGAGGAAGGATTATAACT
AGGTGATGTAGGGCTGTAGCTTGGAGAGGTGGGACTGTAGCTAGGAGATGTTGGACTGTAACCAGGAGAGGTCGGGCTATATGCCGGAGAGGTGGGGCTG
TATGATGGAGAGGTTGGACTATAAGAAGGTGAGGTTGGGCTATAGGATGGTGAGGTCGGGCTATAGGAAGGTGAGGTGGGGCTGTAAGCAGGAGAAGTGG
GGCTGTATGCAGGAGAAGTGGGGCTGTATGAGGGTGATGTTGGGCTGTAGACAGGAGAAGTTGGACTGTAACTTGGAGAAGTAGGACTGTAGCTTGGAGA
TGTAGGACTGTAACTGGGAGATGTGGGGCTGTAGCTGGGGGATGTGGGGCTGTAGCTGGGTGAGGTTGGGGAGTAAGATGGACTTGTGGGAGAATATGCA
GGACTTGTTGGACTATATCCAGGAGAGCTGGGACTGTATGTAGGTGAGGTAGGGCTGTAACCAGGTGAAGTGGGGCTGTATCCTGGGGAGGTTGGACTGT
AG