Detailed information on CNT30573841


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 1e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376889Vitis viniferaArabidopsis thaliana51.0569.1480.99242forward
CNT30524932Vitis viniferaPhaseolus vulgaris64.3565.0380.66305forward
CNT30205386Vitis viniferaHelianthus annuus71.7347.5581.76340forward
CNT30410012Vitis viniferaPapaver somniferum62.4577.8984.46296forward
CNT3051546Vitis viniferaAmborella trichopoda80.879.4683.03383forward

Expression of CNT30573841

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSDCKGLMEIVLDCWENMPVMGCILLRKDYN*

>peptide 2 (50 aa)
MLDCNQERSGYMPERWGCMMERLDYKKVRLGYRMVRSGYRKVRLGYRKVR*

Sequence

>CNT30573841
ATGTCGGACTGTAAGGGCTTGATGGAGATAGTCTTGGACTGCTGGGAGAATATGCCAGTGATGGGCTGTATTTTGCTGAGGAAGGATTATAACTAGGTGA
TGTAGGGCTGTAGCTTGGAGAGGTGGGACTGTAGCTAGGAGATGTTGGACTGTAACCAGGAGAGGTCGGGCTATATGCCGGAGAGGTGGGGCTGTATGAT
GGAGAGGTTGGACTATAAGAAGGTGAGGTTGGGCTATAGGATGGTGAGGTCGGGCTATAGGAAGGTGAGGTTGGGCTATAGGAAGGTGAGGTAGGGCTGT
AACCAGGTGAAGTGGGGCTGTATCCTGGGGAGGTTGGACTGTAGCCAGGAGAAGTAGGGCTATAACCAGGAGATGATGGACTATATCCTGGAGAAGATGG
ACTGTAACCTGGTGACGATGTAGGAGAGAATGCCATGCCCCCAACATAAGGAGAAAATTGTGCATCTGTAATTG