Detailed information on CNT30573761


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42823|RBS_GLYTA, E-value = 7e-42

BLAST vs NONCODE:
NONVVIT001317, E-value = 2e-140

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535656Vitis viniferaEucalyptus grandis20.3115.691.0378forward
CNT30381490Vitis viniferaManihot esculenta21.8813.2786.984forward
CNT30629679Vitis viniferaVigna unguiculata20.0514.0889.6177forward
CNT30633374Vitis viniferaCapsicum annuum20.058.9789.6177forward
CNT3091744Vitis viniferaSolanum tuberosum23.448.7788.8990forward
CNT30605276Vitis viniferaGossypium raimondii20.3119.7589.7478forward
CNT30623489Vitis viniferaDaucus carota25.7814.9384.8599forward
CNT30355778Vitis viniferaLactuca sativa21.6110.5687.9583forward

Expression of CNT30573761

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MKAMHCTWRLLSNPMIRMWASGYAVLASCTSLITWAESVHPNMGSFHMVQYLPS*

>peptide 2 (53 aa)
KTWTSNIAETGSAGLVGNESDALHLAVIVESDDSDVGVRVRGPGFLHLLNHLG*

Sequence

>CNT30573761
AAAAAACATGGACATCAAATATTGCGGAAACAGGATCAGCTGGGCTTGTAGGCAATGAAAGCGATGCATTGCACTTGGCGGTTATTGTCGAATCCGATGA
TTCGGATGTGGGCGTCAGGGTACGCGGTCCTGGCTTCTTGCACCTCCTTAATCACCTGGGCTGAGTCAGTGCACCCGAACATGGGCAGCTTCCACATGGT
CCAGTACCTTCCGTCGTAGTATCCTGGCGATCTGTTGTGCTCTCTGTGGGGGGGGCCACCATGTTGGCCTGAGCCGGGGTAGCACGGTTGATTGTAGCCA
CGGTGGCGGAGGAGACCATGGAGGAAGCCATTTTCGCCTTTTGGGTTTTGCTAACACCACCACTGCCTTGTGAGTTATGGCTCC