Detailed information on CNT30573622


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6VAF4|TBB9_GOSHI, E-value = 1e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522590Vitis viniferaSetaria italica30.885.0284.5284forward
CNT30727960Vitis viniferaCorchorus capsularis29.4115.9788.7580forward
CNT3047350Vitis viniferaPrunus dulcis34.1940.7989.2593forward
CNT30397469Vitis viniferaTriticum turgidum44.8510.3383.61122forward
CNT30627268Vitis viniferaDaucus carota93.3820.5281.5254forward
CNT30684516Vitis viniferaTriticum urartu30.8831.9484.5284forward
CNT30721065Vitis viniferaTriticum spelta54.7866.5279.87149forward
CNT30426941Vitis viniferaPapaver somniferum28.3113.3784.4277forward

Expression of CNT30573622

Peptides detected in this lncRNA

>peptide 1 (89 aa)
LRPLSVVTFGPVVARTRLPKNEIIGSENLAVRSRSDAVHGARLQIHEHCPGHEPPTTRLVVVHIDSLQLQLRVALVAPGGVDAVLSADHL

>peptide 2 (34 aa)
PPPQCSDLWPSCCPHPTAQKRNYRVGKSGRTVPI*

Sequence

>CNT30573622
CTCCGCCCCCTCAGTGTAGTGACCTTTGGCCCAGTTGTTGCCCGCACCCGACTGCCCAAAAACGAAATTATCGGGTCGGAAAATCTGGCCGTACGGTCCC
GATCTGACGCTGTCCATGGTGCCCGGCTCCAGATCCATGAGCACTGCCCTGGGCACGAACCTCCCACAACTCGCCTCGTTGTAGTACACATTGACTCGCT
CCAGTTGCAGCTCCGTGTCGCCTTGGTAGCGCCCGGTGGAGTCGATGCCGTGCTCAGCGCAGACCACCTCCC