Detailed information on CNT30573603


BLAST search results

BLAST vs Swiss-Prot:
sp|A2ICC6|THS7_VITVI, E-value = 0.0

BLAST vs NONCODE:
NONVVIT001225, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045137Vitis viniferaPrunus dulcis3.9922.9192.3152forward
CNT30152294Vitis viniferaPrunus persica3.9920.5592.3152forward

Expression of CNT30573603

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MFGLLKQVERGVVQSRHLDQIQQSQLQTHHQKGLDLPKSLKHPQKAHEM*

>peptide 2 (84 aa)
MLCSTTVSIVKPGPKPNSTPQSNPSPVVAFSPFRDFFLISSKINNTHALDMLPYSLNTCLVASSFFFSKLSFASTASRIAGPPG*

>peptide 3 (29 aa)
FLYLFFHQIYMNTTLKYLKNLQDNETLST*

>peptide 4 (63 aa)
MGDLGLWLAPLFKSLQCCFFTKFGYLSSDNLLSYVKRWSHISTNVWVLLKHFFGQVNVTLLDH*

Sequence

>CNT30573603
CTTCCTTTATTTATTTTTCCATCAGATTTATATGAACACAACATTAAAATATTTGAAGAATCTTCAAGATAATGAAACATTGAGCACTTGAAACTCATCT
TTTTAATTTCAGCTCACAAAGAAAGTCTAATAGTGACTCAATTACAATCCAAATTTATCAATGTAATGAAATACTATAAGAGTATTATCAATTTTGGAGA
TAAATACCTTTATTAACTCCTATTTGATACAATACAACATTAAAGGTACCATTCTCCTTTACTTCACTTAATTTGAAACCGTAGGAATGCTATGTAGCAC
AACAGTTTCGATAGTCAAGCCGGGCCCAAAACCGAATAGTACTCCCCAATCCAATCCTTCACCTGTGGTGGCATTTTCCCCCTTTAGGGATTTCTTTCTC
ATCTCATCCAAAATAAACAACACACATGCACTAGACATGTTACCATACTCACTTAACACATGCCTTGTTGCTTCAAGTTTCTTTTTCTCTAAATTGAGTT
TTGCTTCAACTGCATCAAGAATTGCAGGGCCACCCGGGTGAGCAATCCAAAATAACGAGTTCCAATCCCTGATACCAAGTGGCTCGAAAGCTTGACTCAA
GCATTTCTCTATGTTCTCGGAAATCAAAGTAGGCACATTAGGCCACAAGTGAAAGGTGAGTCCCACCTCACGTAAGTTACCCGCAATAGCACCTGCTGAA
TTAGGAATAAATGTTTGGGCTGCTGAAACAAGTTGAAAGAGGGGTCGTTCAATCGAGACATCTGGATCAGATCCAACAATCACAGCTGCAGACCCATCAC
CAAAAAGGGCTTGACCTACCAAAGAGTCTAAAGCATCCTCAGAAGGCCCACGAAATGTAACAACGGTGATCTCAGAGCACACCACAAGAACTCGTGCTCC
TGCATTATTTTCTGCAAGATCTTTAGCAGTTCGAAGGACAGTTCCACCTGCATAGCACCCTTGATGGTACAACATGACCCTTCTAACCGATGTTTCAAGG
CCTAAGAGATTAGCGAGTTTGTAATCCGCACCGGGCATTTCTACACCGGAGGTTGTACAAAATACAAGATGGGTGATCTTGGACTTTGGTTGGCCCCACT
CTTTAAGAGCCTTCAATGCTGCTTCTTTACCAAGTTTGGGTACCTCAGCAGTGATAATCTCTTGTCGTATGTTAAGAGATGGAGCCATATAAGCACCAAT
GTTTGGGTGCTCCTCAAGCATTTCTTCGGTCAAGTGAATGTAACGCTTCTTGATCATTGATTTGTCACCTGTAAATAAAGTAACATGAACACATTAATTT
TACC