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Detailed information on CNT30573521


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 9e-67

BLAST vs NONCODE:
NONVVIT001259, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30707309Vitis viniferaPrunus avium37.7131.9183247forward

Expression of CNT30573521

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MQFFPYIQMIINPFWEIYLASTLYTNINVLPSSNHFK*

Sequence

>CNT30573521
TGTTGAACAACTACAATATGAATTTTTATTAAACTATACATTCATAATAAGTTGAACATATAGACAATTATTTTTACTCTAGTTCTGAAATTATTGCCAA
CTCTTGTTGAAAAACTCTACCTGGCTTGCTCAAGTTTGTTGGAACTGTTGAAGCAAAAGGGTTAGGAGGCATGGTTAACTTGTCTCCTTCTCCTTCCAAC
ATTTGAACCACAATTTTCATGGAAGGACGATCCACTGGACACCACTGAATACATGAAAGTCCCACAATTGCTAATTTCTTTGCAATCTCAACATCTCCTT
CTTCTTTAATTCGAATATGCAATTCTTCCCCTATATCCAAATGATTATAAATCCATTCTGGGAAATATACTTGGCTAGTACTCTCTACACTAACATCAAT
GTTCTTCCTTCCTCCAACCATTTCAAGTAACAACATTCCAAAACTATAAACATCTGACTTATAAGACACATTCCCAAAATTCCTAGATAACACTTCTGGA
GCGATATAGCCCATTGTTCCCCTTACAATTGTCATAGAGACTGCACTTTGTTCCTTGGAGCACAATTTGGCTAAACCAAAGTCAGAAATCTTTGGATTAA
AGTTGTGGTCAAGTAAAATATTATGAGGTTTGATATCAAAATGAAGGATTCTTTG