Detailed information on CNT30573490


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 7e-125

BLAST vs NONCODE:
NONVVIT001259, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30314996Vitis viniferaCorylus avellana19.2259.7880.74706forward
CNT3069516Vitis viniferaQuercus suber7.2184.1381.89265forward
CNT30713283Vitis viniferaMalus domestica golden8.625.5980.38316forward
CNT3026124Vitis viniferaPopulus trichocarpa8.8546.7680.92325forward

Expression of CNT30573490

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVDCTHRCHFINELFSISLRIIKDFYCNKNFM*

>peptide 2 (33 aa)
MWIPIKIRKMIFMKIFTQLSLLGVATKMDYQGG*

>peptide 3 (36 aa)
MRFDIKMDDSLITTLMKILNSFRYTYSNFLKFLPTE*

>peptide 4 (41 aa)
MRVPQLLISLQSQHLLFLQSEYTILPLYPNDYKSILGSILG*

>peptide 5 (29 aa)
MIINPFWEVYLASTLHTNINVLPPSNHFK*

>peptide 6 (55 aa)
MSGPWSPQRFDVMHSSRPPLISTNKVRNKNKNKQRYRSIFMEGICDFCQGQKSLG*

>peptide 7 (61 aa)
MSCTHLGPLSSPQTRSETRTKTNRDIDPFLWKEFVTFAKDRSLWDRKESGKGDTNIERRLA*

Sequence

>CNT30573490
CTTGGACATATTCATTAAAATATCATACATGATAAATACATTACATGGGAACAAGAACTTCTAGAATCTAACATCAATTGAGCCACTGGTATAATCATTG
TGTACAATCATTTGTTCAATTAACAGAAATATAAATAGAAATGCTACGATGATGAACAACTACAATATGAATTTTTATAAAATTACACATTCATAATAAT
TTGATGCAATTATTTTACTCTATTTCTGAAATGATTGCTAACTCTTGTTGAAAAACACTTCCTGGTTTGCCCAAGTTTGTCTTTGTTGGAGTTGTTGAAG
CAAAAGGATTAGGAGGCATGGTTAACTTGCCTCTTCCTTCCAACATTTGAACCACAATTTTCATGGAAGGACGATCCATTGGAAACCATTGAATACATGA
GAGTCCCACAATTGCTAATTTCTTTGCAATCTCAACATCTCCTTTTTCTTCAATCCGAATATACAATTCTTCCCCTATATCCAAATGATTATAAATCCAT
TCTGGGAAGTATACTTGGCTAGTACTCTCCACACTAACATCAATGTTCTTCCTCCCTCCAACCATTTCAAGTAACAACATTCCAAAACTATAAACATCTG
ACTTATAAGACACATTCCCAAAATTCCTAGACAACACTTCTGGAGCAATGTAGCCTATTGTTCCCCTTGCAACGGTCATAGAGACCGCACTTTGTTCCTT
GGAGCACAATTTGGCTAAACCAAAGTCAGAAATCTTTGGATTAAAGTTGTGATCAAGTAAAATATTATGAGATTTGATATCAAAATGGATGATTCTTTGA
TCACAACCTTGATGAAGATACTCAATTCCTTTCGCTATACCTATAGCAATTTCTTGAAGTTTCTTCCAACTGAGTGAATAGTTCTTAACATCTCTTGAAA
ATATGAACTTCTCTAATGACTCATTTGGTAAGTACTCATAAATTAGAGCTCGTTTAAATCCATCAGCACAAAATCCGACTAAGCGAACTATATTAACATG
GTGGATTGTACCCATCGTTGCCACTTCATTAATGAACTCTTCTCCATTTCCTTGAGAATTATTAAGGATTTTTACTGCAACAAAAACTTCATGTGAAAGC
TTTCCCTTGTACACTGTTCCATAACCTCCTTGGCCTAATTTATCTTTGAATTGATTTGTAATCCTTTTAATATCAACATAGGAGTATCTTGAGGGCTTGA
GAGCTTCATAGTCTTCCAGAAACCTTTTAACCTTTATTCCATTCTCTCTTTCTAATTTATCTGAGCTATAGAGACGATAAAACATAGCAATTACTAACAC
AAGTAGAAAGAAACCAAAGATTGTGCCTACAAACATAAAAAGAAGAAAACTTAAACTTTTTTTATTTAAATAAATAGATAGAATAACCAAGTTAAGAATC
CTTATTTCTATAATAAAAATGCATAAATAAAATATTACCTGTTACCATTGCTTGCTTTGATACACCTGTAAAATATTTAAAAAATAATAATAATTATCTT
GTTGTGCTCTTGGAATTAACAAAATCATGCTAAATTACATGCATATGATATGATTTTAATTTAATTTTATTCTAGGCTTCAACCCTATCTTTTGGGTCTC
TTTCTTATAGTCTACATGTTGAGTACCAATTCTACTGGTAACTCCATTCTAACTTGTAGTGGAGATTAAAACTTACCCTTCTAATATCTATTATGTATCT
TAGTTAAACTATTCTGTTTCATAATAACTTACTGTCGTAATGAAGCCCTCAACACTAATTCACCTTATTTTATAAAAAAAACTAAAATAAAAATAAAACT
CTATCTCAAACAAATCTCTACTCTTATCCTATGACATTATATATAGTGAGATTCCAATTGGTGAATTCTATGACACTTGGCAATTTGATTGACCATTAAC
ATATAACTTCTCATGTTAGATAAGAGGGCAAAGGTATCCATGCATGTGGATACCCATTAAAATTAGGAAAATGATATTTATGAAAATTTTTACACAATTG
TCATTATTGGGAGTTGCAACAAAGATGGATTACCAAGGAGGTTAGTATTCTCTACTTGGATATGAAACAATAAATGAGAAAATAATCTATTTTAAACAAT
CTTTAGTAATTTTCTTTTAGTTCCTTAAACATCTCCAAAATCCAAAATGAATAGTTGAATATCAATTATATTACTTTGCATTTTTACATTCACATTGTTG
GAAAAGTATGGAGAAACAAAAAAAAAAAAAAAGTACTTGTCATAAGTAGTTAGAAAAGAATCCATTACAAAAGAACTTTTAACATTGTTGTTATATTTCT
TTAATTTTTCAAAAAATTAACTCCAAAATAAACATTTAGCTCTTTGTCCAATTATTTCCTTATAACTTTTCAGGGCTCTAAAAATTTGAAGAAAGAAAAG
AAACAATATAAAACTTTAGCCCAAAAATTCATGGTTGATAATTTCTTTACTCTTGTTACCATTTTTGCATAAAGACAATAGTTTAAAAATGTATAAAATT
ATTTTCATTAATTAATTATTATTTCAATTTATGACCTAATATAGACAAAATATTTCGGTGAAAGAGGCAAAATGATTAGAACTTAAAAAAAATCCTCATG
TAAATAGTAAGTAAACATATAGTACTTTGATTGGTTGTAATCAAATTGATCTTTTTTTCTTTTTTTCTTTTTTATTTTTTATCTTTCAGACTTTCAGAAT
CCCAATAAAAAGTAAATTCCATCCAAGATTTTAGTTCTACTTTCCATAGCTTAGAAACTCGATCAGTAGAATTTATCAGCTCATATCCTTTGCAATGGCT
TTTTAATTCCAAAATGGAGTATTTGTTTATTAGATCATTGTAGAGGATATGAGGCGGGAATGAAAGATGAAAAGAAGATGAATAGGGAATTGAGATACAT
AAAGTACCTTTAATACATTCAGTTTCTGGTTCCCTGCTATTACTCTTTTTCAGTCTGCATATGTGTCCTCCTCGTAGGCAGCTTCCACATATTGATTTCG
GCCACTTCAAAGAAAACGCACTTCCATTGAATGTATAATCCGTAAAGACATGATATCCAACTGAAGCGTTGTAAAGCCTGCGGCAAGACGATAGCATAAA
CTGGGTTACCAGGGATAGAAAGGCAAGGGATGGACTGAAAACCATATGATTCTGTTTTGTCTGAGGAACAAGTGAAGAGGGTGAAGTCCCGTTCAAATTT
GAAGTAGAAGGGGGAGGCAGCTAAATTAAAGTTTCGAAGCTGTCTCGCAAGGCAATTATCCGGGTCCTGGACAATGATTTCCCGGGATTTGTAAGCTATT
TTCTTCACCAAGATCTTTACCGAAACTGGCAGGTCTAGCATGGTCTGATTATTCTCAGTGCAAGATAACTCAAATCCCGGATATCCACAGTGGTGTGGCC
GGTCTTTTAGACGGAAAGGGAACTGGATGAGTGGACCCTGGTCGCCACAACGATTTGATGTCATGCACTCATCTCGGCCCCCTCTCATCTCCACAAACAA
GGTCAGAAACAAGAACAAAAACAAACAGAGATATCGATCCATTTTTATGGAAGGAATTTGTGACTTTTGCCAAGGACAGAAGTCTCTGGGATAGGAAAGA
AAGTGGAAAGGGAGATACAAATATCGAGAGGAGATTAGCCTGAAAATTTATAGAGAAGAATTGTAGGAAGGAGG