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Detailed information on CNT30573477


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 2e-122

BLAST vs NONCODE:
NONVVIT001264, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315005Vitis viniferaCorylus avellana21.0818.4281.16329forward
CNT30515782Vitis viniferaJuglans regia16.5320.2779.84258forward
CNT30701990Vitis viniferaQuercus lobata20.6955.3182.04323forward
CNT30501297Vitis viniferaCoffea canephora7.8829.6483.74123forward
CNT30495369Vitis viniferaOlea europaea10.8346.1781.66169forward
CNT30128098Vitis viniferaCorymbia citriodora9.0344.6282.27141forward
CNT30109318Vitis viniferaOryza longistaminata3.9723.9487.162forward
CNT3024160Vitis viniferaPopulus trichocarpa6.4121.2883100forward

Expression of CNT30573477

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MMGNIFDLNALQMHSHSSFFPPFPITTFQNYKHQP*

Sequence

>CNT30573477
AACCAAACTATTGTTTGAAGTAGAAACTTTATTTTATTACATACACTGATCTCATAGAAACCTTACACATAAGACACAATCACACATTATTATTGGATTA
CAAAATAAGCAACTAGATGGAGTAGGACTACCTTCCATTTAAGCTGATTGTACCCATGGAATTGGATGATGAAATTGGTACCTCTACCATGGATTGCTCA
TGATTCTCGATAGACCATAGAGTTGGCTTAGGAGGCATTTTCAATAGTTCAATCTCTCCTTCAAGCATCTCCAATGTTTTGCTCATTGAAGGACGATCCA
TAGGCTTCATTTGTACACACCATAGCGCAACTATCACCATTTTCCTTACATACTTTTTTTCATCCTCAGTGGCATCTCCCATTTCCATGTCCTCTCCTTG
ATCATATCTATCATAAATCCATGATGGGAAATATATTTGACTTGAATGCCTTGCAAATGCATTCACATTCTTCCTTTTTCCCACCATTTCCAATAACAAC
ATTCCAAAACTATAAACATCAGCCTTAAATGATACACCTCCAATGTTTTTGTAGAACAATTCAGGAGCAATGTAGCCCAAGGTTCCTCTAGCAGCAGTGA
CTGATACAATACTTTCATCTGTTGAGTATAATTTTGCAAGACCGAAATCTGAAACTTTTGGTGTGAAGTCTTCATCAAGAAGAATGTTGTGTGGCTTGAT
ATCAAAATGAAGAATTTGCATATCACACCCTTGATGTAAGTATTCGATCCCACGTCCTACTCCAAGTGCAATCTTGTATAATCTTTCCCAACTCAAAGGA
ATGTTGTTTCCTTGATCAAGAAAAACAAACTTATCAAGAGATCCATTGGGCATGTAGTCATATATAAGGGCCCATTTTGATCTCTGTATGCAAAATCCAA
CAAGTCTCACCACATTAACATGATGAATTCTTCCAATTGTAGCAACTTCATTGATAAAATCTTGCCCATTAGCCTTTGACATAACCAACATTTTCACAGC
TACAATGCGGCCACTTCGGAGTTTTCCTTTGTACACAGAACCAAAACCTCCTTGACCTAATTTATGCTTAAAATTATAAGTCATCTTCTTTATGTCCGAA
TATGTGTATTTGATTGGTTGAAGATTTTGGTAGTTATGTAGGAATTCTTCAATATCATCATCTAATGATAAGTGTCTCCGTCGAAACTTGTAAATTAAAT
AGGCAAAGAGGCACAAAATACCAATCACAGCTCGTCCGATAATGATCATGGCTACATATAAATCACATGTTATAGATATGAAAAACGTCAGAGGAAGATT
TATAATCATCTAACCACATTCAATCATCAAATCCAGCAAATAGAATTAGTTTTGAAATGGTCATTTCACCCATATCTTAGGTTTTGGATTTCCACTCAAA
CATAGTTATGTGACTCTTTTTCTTTTGGGTGACAGCATGATATACATAAAGGATGGAATAATCAATTGAGAAATTTTTTTTTGTTGTACAAAATTAAGGA
ATGAAATTAGATGCCAAATTCCAACTATATTCTTCAATTTCCTTGTACTCTAACAAATTTG