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Detailed information on CNT30573413


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 5e-102

BLAST vs NONCODE:
NONVVIT001259, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30699090Vitis viniferaQuercus lobata15.2266.1683.08260forward
CNT3090659Vitis viniferaSolanum tuberosum18.2155.6480.06311forward
CNT30152410Vitis viniferaPrunus persica7.1428.8485.25122forward

Expression of CNT30573413

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVDCTHCCHFINELFPISLRIVKDFYCNKNFI*

>peptide 2 (36 aa)
MRFDIKMKDSLITTLMKILNSFCYTYSNFLKFLPTK*

>peptide 3 (37 aa)
MKLYVKRMWSNVYPYSIPLYIVIQLVGTITLVGLIDH*

>peptide 4 (53 aa)
MTPSDTNSSYFMTKTKIKNETLCKKNVEQCLSLFYTIIYSDPIGRYDNACRFD*

Sequence

>CNT30573413
TACTCTCCACACTAACATCAATGTTCTTCCTTCCTCCAACCATTTCAAGTAACAACATTCCAAAACTATAAACATCTGACTTATAAGACACATTCCCAAA
ATTCCTAGATAACACTTCTGGAGCGATATAGCCCATTGTTCCCCTTATAACTGTCATAGAGACTGCACTTTGTTCCTTGGAGCACAATTTGGCTAAACCA
AAGTCAGAAATCTTTGGATTAAAGTTGTGATCAAGTAATATATTATGAGGTTTGATATCAAAATGAAGGATTCTTTGATCACAACCTTGATGAAGATACT
CAATTCCTTTTGCTATACCTATAGCAATTTCTTGAAGTTTCTTCCAACTAAGTGAATAGTTCTTGACAACTTTTGAAAATATGAACTTCTCCAATGACTC
ATTTGGTAAGTACTCATAAATTAGAGCTCGTTTAAATCTATCAGCACAAAATCCAACTAAACGAACTATATTAACATGGTGGATTGTACCCATTGTTGCC
ACTTCATTAATGAACTCTTCCCCATTTCCTTGAGAATTGTTAAGGATTTTTACTGCAACAAAAACTTCATCTGAAAGCTTTCCTTTGTACACAGTTCCAT
ATCCTCCTTGGCCTAATTTATCTTTGAATTGACTTGTGATCCTTTTAACATCAACATAGGAGTATCTTGAGGGCTTGAGAGCTTCATAGTCTTCTAGAAA
CTTTTTAACCTTTACTCTATTCTCTCTTTCTACTTTATCTGAGCTATAGACACGATAAAGCATAACAATCACTAACACGAGAAGAAAAAAACCAAAGATT
GCACCTGCATACATAAAAAGAAGAAAACTTAAACTTTTTTATATAAATAAATAGATAAAATAACCAAATTAAGAATCTTTATCTCTATAATAAAATATTT
ATGAATAGAATATTACCTGTCACAATTATTTTCTTCGATACACCTATAAAATATTAAGAAAAAAAAAGTAATTAGCTTGTTATGCTCTTGGAATTAAAAA
AAAATCATGCTAAATTACATGTTCATGTGATATGATTTTAATCTAGTTAATTTTAGGCTAGGCCTCAACCTTATCTTTTGGTTTCTTTCTTGTATTCTAT
GCTTCTACTTTTAAGGTTGTACCAATTCTACTACTAACTCTATCCTAACTTGTAGTGAAAATTCAAACATACCCTTCTAATCCCTATTATGTATCATAGT
TAGACTATGTTTCATAATAACTTACTGTCTCCATGACTCCCTCAGACACAAATTCATCCTATTTTATGACAAAAACTAAAATAAAAAATGAAACTCTATG
TAAAAAGAATGTGGAGCAATGTCTATCCTTATTCTATACCATTATATATAGTGATCCAATTGGTAGGTACGATAACGCTTGTCGGTTTGATTGACCATTA
ACATCTAACTTCTCATCTTAGATATAAGGGAAAAGTCATCCATGTGGATAACTATTAAAACTAGAAAAATGATGTTTATGGAGTTTTTTTTACACAATTG
TAATTATTGAGAGTTGAAATAAAGATGAATTACTTGGAAAGTTTAGGGTTAGTATGGTCCACTTGGATATGAAAAAATAAATTAAGAAAATAATCTATAT
TCAATAATCTTAGTAATTTTCTTTTATTAAATATTTCCATATCCAAAAGGAATGCTTGAATATCAATTGTATTACTTTGTATTTTTAGGTTCACATCCTT
GGAAAAAT