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Detailed information on CNT3057337


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70Y11|RR2_AMBTC, E-value = 8e-141

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Amborella trichopodaOryza sativa20.1813.383.11752forward
CNT30535895Amborella trichopodaEucalyptus grandis5.0433.9489.89188forward
CNT30317837Amborella trichopodaCorylus avellana13.246.7784.55492forward
CNT30616942Amborella trichopodaSesamum indicum7.3826.0280.36275forward
CNT30272039Amborella trichopodaChenopodium quinoa13.7971.6982.68514forward
CNT3021394Amborella trichopodaCitrullus lanatus16.7299.3686.2623forward
CNT30198909Amborella trichopodaPisum sativum15.5925.7581.41581forward
CNT30505351Amborella trichopodaNicotiana attenuata20.1521.6185.75751forward
CNT30179302Amborella trichopodaSecale cereale6.0935.2585.02227forward
CNT30291829Amborella trichopodaTriticum aestivum20.1819.0883.24752forward
CNT30226738Amborella trichopodaHordeum vulgare8.9925.6984.78335forward
CNT30541450Amborella trichopodaBrassica napus20.2326.8282.63754forward
CNT30238613Amborella trichopodaBrassica oleracea9.1565.782.4341forward
CNT30511101Amborella trichopodaSolanum lycopersicum20.1861.5982.45752forward
CNT30553466Amborella trichopodaOryza glaberrima3.625.6782.84134forward
CNT30172770Amborella trichopodaTrifolium pratense6.7949.6184.19253forward
CNT30668721Amborella trichopodaTriticum dicoccoides4.1643.0683.23155forward
CNT30598585Amborella trichopodaFraxinus excelsior4.9121.4587.98183forward
CNT3017990Amborella trichopodaZea mays21.8924.6682.6816forward
CNT30232563Amborella trichopodaAnanas comosus20.1221.8986.53750forward
CNT30205079Amborella trichopodaHelianthus annuus4.724.286.86175forward
CNT30626489Amborella trichopodaDaucus carota4.7520.1892.09177forward
CNT30687393Amborella trichopodaTriticum urartu8.861.8982.32328forward
CNT30409854Amborella trichopodaPapaver somniferum4.5125.3487.5168forward
CNT30726491Amborella trichopodaLupinus angustifolius20.1264.3883.47750forward

Expression of CNT3057337

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTGIGTNEGTKETRTITTNSSANIFPKRP*

>peptide 2 (34 aa)
MVKHSYYPLTKMKLKLRRNYFDSFISFSTVLLWL*

>peptide 3 (37 aa)
MLLNLLLYFSYLLLRSAFLYLLHKKLNSRLLIKNDQF*

>peptide 4 (44 aa)
MDMETPNLPIEMLAYSTPDRSYIPFSVLMEHGKTFILPLDKNET*

>peptide 5 (67 aa)
MTSSSKICNMNAFTLSRVIRYHSRIPFPSTMTKMNPYSYHIFQIDVPISYCHFYPHYLFFFFRNEVP*

>peptide 6 (39 aa)
MGQMGILGKRLFGVFPFCLLSEFCNILYISFYHFILYVP*

>peptide 7 (42 aa)
MNKKKPNEMRTVNGYIYMEVEVSSFFFVACRKQITIVIQIMT*

>peptide 8 (37 aa)
MMVLLSDGNPFGSSSSISLFCSRTFLSILRSFSFICI*

>peptide 9 (38 aa)
MSQTDNNRYSNYDMNGTNGDLRKKTFWGFSFLFAFRIL*

>peptide 10 (37 aa)
MVCGFRTTIVAEPNKIAITTQEVISTWAWTWKPPICQ*

>peptide 11 (37 aa)
MEIHLVLVLLFLCSVPEPFFQFFALSPLYAYDLIDFI*

Sequence

>CNT3057337
TATAGTTTTCTTAAGTAAAATAAAAAAATAAAATATATAATTCTAATATAAATGAGAACGAGTAAAGTGCAGCTGGTAGGATCCAACCTATTCTTGAAAT
AAACAACTCGCATACACTCCCATTCCGAAAAAAATCAACACACCAAGCACCACACTTAGATTTATTGGATTTGTTGCAAAAATATCGGTATTAAATCCGA
AACTTCTGACAGATGGCTAGTGGCCCAAGGAAAAGAAAGAGTCGGTTACATTTTTCATATACTCTCCTCTTCTAGATAGGACTAACAAAACCAAACAAAG
TTCTTTTTGTATCACTTCAGCCCATATCTTATTTTTATTTAATTGAAGTTCCCGATAAGATACTTTAGTAGGTTAGGTTAGGTCTCGGGTCTCGTATCAT
TTTGGAAATACCTCGCACGTTGCAACACTTCGAAAAGTTGTTTCCTTTGGACGAAGAGCGGGAAGGAAGAGAACGAGCGGATCTGCTAATTCCTCGAATC
AATCTTTACCCCGGGGGTGATTGTCTCAAAATGAATAATTTATTGTAGAGTGAAGTGTTGATATAATTCGAAGAAGTGGCAAGTCCAAGGTAATAGGTAT
ATTATGTATTTTTAGGAGTAAACAAAGGGATTCACAAAGAAAAGCGTTAATGCCACGACCAGTCCATAAATTGTTAAAGCTGCCATAAAAGCCAGGCTAA
GCAATAAAGTACCTTGTATTTTACCCTCTATTTCTTGTTGTCTCGTAATACCCTCTACAGCTTTACCCGCAACAGTACCTTGACTGACTCTAAGTCCAAT
AGAGGCAAGTCCTACAACCAATCCAGTAGCAATAACAGAAGCAACAAAAATAAGGGGATTCATACCAAAATTAAGAAATGGTTAATGATACAATCAACTA
ATTAATTATTTTTATTTTATTGCTAATTATTCCATAACTAAGATCCATATGATCGAAGTAACTAATAACTCTGAATTGAAATGATGGTATTACTGTCAGA
TGGAAATCCATTTGGTTCTAGTTCTTCTATTTCTTTGTTCTGTTCCAGAACCTTTCTTTCAATTCTTCGCTCTTTCTCCTTTATATGCATATGATTTGAT
TGATTTTATTTGATCTGTTTAGTCATTCAATCCATAGTTACAGGAAGTGCTTATATCGGAATCTATAATTTGGTTTGATGGGAAGTGGGAAATAGAAAAT
GACACTATATGGATAGTCCATAACGGATAGTCCATATATAAGTAATGACTAATGAGTATCTAACAACACATATACATGTATCTCTTCGATAATGTAAACC
ATCCGCATCTTAGTCTTATATAGAATAGAATTGGATTTTATAGAATTGGATCGTATCCTAGAATCATTCCTATCCCACTTTGAATCTTATTCGTATTCGT
AAACTCCTCCTTTTCTTTATCAACACACGAATACAACGGACAGATCCATAGCTTGAATCGTCACACATAAAAATTCAAAGTATCCAATTGCAATTAATTA
CAATTTTCGATCAATCGTTGAATGAATAAAAAGAAACCAAATGAAATGAGAACGGTTAATGGTTACATATACATGGAAGTAGAAGTAAGTTCTTTCTTTT
TTGTCGCATGTCGCAAACAGATAACAATCGTTATTCAAATTATGACATGAATGGGACAAATGGGGATCTTAGGAAAAAGACTTTTTGGGGTTTTTCCTTT
TTGTTTGCTTTCAGAATTTTGTAATATCTTATATATATCTTTCTACCATTTTATATTGTATGTACCGTAGACTGTCGTATCTATCATGTTCCCCAACCCC
AAGTGGTATCTTTAGCCATCCATGAATTGGAATAACATTAACAGACTTTTTCATTTTTATTTTAAGAATGATTGTTTTGATTGTGATTGATTTTGAAAGT
TATTCAATGATGACCCTCCATAGATTCGCCTATATAAGTCGCGGCTAAAGTTACAAAAATCAAAGCTTGAATACCACTTGTGAATAATCCGAGGAACATG
ACAGGTATAGGAACCAATGAAGGGACTAAAGAAACAAGAACAATAACTACTAATTCATCAGCCAATATATTCCCAAAAAGGCCATAAAGGTTTTATCAGA
TCTTCTAAGGTATTAATGATAAAAGTATGGGAGTTGGTTGAATATATTTACGGAAATAACCAATCCTTTCTTGCTAATACTTGCATAGAAATATGCCACT
GACGTGGGTAAAGTTAAAGCAACAATAGTATTTATATCATTTGTAGGTGCAGCTAACTCCCCCTGAGGTAACTCCATGATTTTCTGAGGTAAAATAGTGT
CGAACCAATTAGAAACAAAAATAAATAGAAACATAGTTCCAATCAAGGGAACCCAGGGACCATATTATTCTTCTCCAATCTGAGTTTTGGTCAAGTCTCG
AATGAATTCAATCACATATTCAAAGAAATTCTGACCATCGGTCGGAATGGTTTGTGGATTCCGAACAACTATAGTGGCTGAACCTAATAAGATAGCAATT
ACGACCCAAGAAGTTATAAGTACTTGGGCATGGACATGGAAACCCCCAATTTGCCAATAGAAATGTTGGCCTATTCCACACCGGATAGATCATATATCCC
TTTTAGTGTGTTGATGGAACATGGTAAAACATTCATATTACCCCTTGACAAAAATGAAACTTAAGTTAAGAAGGAATTATTTTGATTCATTCATCTCTTT
CTCTACTGTCCTACTTTGGCTTTGACTTTGGTTTGACTTTACTTTAATTGCATAGTATATTCCAGATACCTAGTAAGAAGTAATCATATATCATGACTAA
TGATTTGAATCTCTTTTTCTAGATTAAGGAATAGTAACCGATTCAATAAATCCTTGATTTACGGAAATAATTGACTTATCTTATTATAATTGACTTATCT
TATTTTTAGTCAATAACTTCCTAGATAGCTATAATGACCCTCACGAATTGCCAATACTAATTTGTTTAGGATCAATTGGATTGAAGCTATAGCGTCATCG
TTGGCTGGAATCGGAATATCTGCGACATCTGGATCACAATTTGTATCGATTAAACAAATCATTGGAATACCCAAAGTGAGGCATTCCCTAATAGTCGTAT
ATTCTTCTTGGTGATCCATGATGATTACATTATCGGGTAACCCCGTCATATATTTGATCCCGCCCAGATATGTTTGCAAGTGAGATAATTGTCTCTTCAA
CATTGCCGAATCTCTTTTCGGTAGACGATTAAATCGACCCATCTTTTGTTCTGCTTTGAAGTCCTTGAACTTATGAAGTCTTGTTTCTGGAGTGGACCAA
TTCGTTGACATACGACCAAGCCATTTTTTATTGACATAATGACATCGAGCCCTTATTGCAGCTGATGCTACTGAATCTACTGCTTTATTTTTCATACCTA
CTATTAAGAAGTGCTTTCCTCTACTTGCTGCATAAAAAACTAAATAGCAGGCTTCTGATAAAGAATGACCAGTTCTAGTAAGATTTGTAATATGAATGCC
TTTACGCTTTCCAGAGTTATAAGGTACCATTCTAGGATTCCATTTCCTAGTACTATGACTAAAATGAACCCCTACTCCTATCATATCTTCCAAATTGATG
TCCCAATATCTTATTGCCATTTCTATCCACACTACCTCTTTTTTTTTTTCAGGAATGAGGTACCTTGAAATCTGAAATATAGAATTGTTCCTACATAACC
TTCTACCGAGGATGGACCGTTGATACA