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Detailed information on CNT30573330


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Vitis viniferaOryza sativa22.629.0986.9669forward
CNT30316259Vitis viniferaCorylus avellana29.8428.5382.4291forward
CNT30549105Vitis viniferaIpomoea triloba31.817.0582.4797forward
CNT30517210Vitis viniferaJuglans regia26.5612.686.4281forward
CNT30728342Vitis viniferaCorchorus capsularis22.310.391.1868forward
CNT30560771Vitis viniferaActinidia chinensis30.1612.0984.7892forward
CNT30541063Vitis viniferaBrassica napus31.1511.9686.3295forward
CNT30609232Vitis viniferaGossypium raimondii22.9513.1888.5770forward
CNT30227805Vitis viniferaAnanas comosus22.314.2988.2468forward
CNT30646773Vitis viniferaRosa chinensis33.1127.3790.1101forward
CNT30211930Vitis viniferaHelianthus annuus24.5922.6685.3375forward
CNT30712987Vitis viniferaMalus domestica golden22.6219.3385.5169forward
CNT30427269Vitis viniferaPapaver somniferum27.2131.3286.7583forward
CNT30706529Vitis viniferaPrunus avium23.284.6288.7371forward
CNT30115961Vitis viniferaOryza nivara22.626.3186.9669forward

Expression of CNT30573330

Peptides detected in this lncRNA

>peptide 1 (77 aa)
RQSQLSKTTMNEAHQGQTVELVEAPYSPCLSVLMSLSSLSVCADVPIGCLSVNLLAPNLTSSSFPSIFLPQILPLQI*

Sequence

>CNT30573330
CGGCAATCCCAGCTCTCCAAAACGACCATGAATGAAGCTCACCAGGGTCAAACAGTGGAGCTGGTGGAGGCTCCCTATAGTCCTTGTCTGTCTGTGCTGA
TGTCCCTATCGTCCTTGTCTGTCTGTGCTGATGTCCCTATCGGTTGCCTCTCTGTAAACTTGTTGGCCCCCAACCTCACATCCTCTTCCTTCCCCTCCAT
TTTTCTCCCTCAAATTCTCCCTCTACAGATCTGAAAACACTGAGAGTTCAGAGCTTAGTGATGAAGATGATGAACTGCGTGAGGAAACCGCGGTGGGGTT
TGGAG