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Detailed information on CNT3057332


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30620034Amborella trichopodaCajanus cajan28.8215.9882.14168forward

Expression of CNT3057332

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MSGPAQYTQWESHDQLTTAGPKETAGFMEAPNVTAGFTCPPEIFAPTDTATNSPKACANDAATSPAGVVDALSVSL

>peptide 2 (61 aa)
MTSSRRRGRRRPRGSWRHQMSQQGSHVHRKYSLRPTQRQIVRRRAPTTPQRAPPAWWMHCQ*

>peptide 3 (54 aa)
MQIVMIQKTKGPRIINNSNYRSCETKEKEKKKKHHCNNTKHREIKEERKALMGT*

>peptide 4 (30 aa)
KTLKKASIDCDFDHSITGNNERFRTQYHGK*

Sequence

>CNT3057332
AAAAACATTAAAAAAAGCTTCAATCGATTGCGATTTCGATCACAGCATCACAGGAAATAACGAGCGATTTCGAACACAGTATCACGGGAAATAACGAACC
CAACATTGCGAATGCAAATCGTGATGATCCAGAAAACAAAGGGACCACGCATAATTAACAACTCCAATTACAGGTCATGTGAAACAAAAGAGAAGGAGAA
GAAGAAGAAGCACCACTGCAACAATACAAAACACAGAGAAATAAAAGAAGAAAGAAAAGCATTGATGGGGACCTAGTAGTCGGTGGTGGGGAGTTGCTCG
TGGGTGTGAGAGATGAATACAGTCTCGTAAATAAGCCCTGCGAGGCCACCACCGATGAGTGGTCCAGCCCAGTACACCCAGTGGGAGTCCCATGACCAGC
TCACGACGGCGGGGCCGAAGGAGACCGCGGGGTTCATGGAGGCACCAAATGTCACAGCAGGGTTCACATGTCCACCGGAAATATTCGCTCCGACCGACAC
AGCGACAAATAGTCCGAAGGCGTGCGCCAACGACGCCGCAACGAGCCCCGCCGGCGTGGTGGATGCATTGTCAGTAAGCTTGT