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Detailed information on CNT30573153


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692141Vitis viniferaOryza sativa26.1524.5981.21165forward
CNT30317088Vitis viniferaCorylus avellana26.7823.1285.21169forward
CNT30616476Vitis viniferaSesamum indicum20.1325.682.68127forward
CNT30589607Vitis viniferaMusa acuminata21.2434.1884.33134forward
CNT30552977Vitis viniferaOryza glaberrima26.1524.6381.21165forward
CNT30132327Vitis viniferaLolium perenne20.4423.6381.4129forward
CNT30345256Vitis viniferaEragrostis tef23.6128.9981.88149forward
CNT30595924Vitis viniferaOryza meridionalis26.1534.0980.61165forward
CNT30153443Vitis viniferaPrunus persica19.8154.8281.6125forward
CNT30101081Vitis viniferaOryza rufipogon26.1513.5581.21165forward
CNT30116289Vitis viniferaOryza nivara26.1521.181.21165forward
CNT30112524Vitis viniferaFicus carica28.3710.4986.03179forward

Expression of CNT30573153

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MGLTGLSGRRWLHIGRRGDRLPQEIRRQLLDALQVKGVEELKGENNLLKLNLTVGPFEDSGTTGDGQIRILVGQVSPLHRYVTIVSRVDLQFNIV*

Sequence

>CNT30573153
TCTTTATTGAAATCTAAATATTACATAGGGTGCTTTAGCTTGTAAAGGCTTGAGCTCCACTTTGGGACAATGACCCCACAACCACTGCCAAAACGCATAA
TTTCCTACTTGTCAAGGGTCAGTCGGTGAAATTAGCAATACAGGCATGGGGCTCACAGGCCTTAGCGGAAGGCGCTGGCTCCACATTGGGAGACGGGGAG
ACCGGCTTCCCCAAGAGATCCGCCGGCAACTCCTTGATGCCCTTCAAGTAAAAGGTGTAGAAGAGCTTAAAGGGGAAAACAATCTGCTGAAGCTTAACCT
GACCGTAGGCCCCTTCGAAGATTCCGGAACCACCGGTGATGGCCAGATACGTATCCTCGTAGGTCAAGTAAGCCCCCTGCACCGATATGTGACCATAGTC
TCCCGTGTAGATCTGCAATTCAACATCGTTTAATTGTAAAAGGTTAGGTAGTGTTTTCTTTTCCACCGAAACGCTAGATTTTCTCGGGAAATTTGAGGAA
AAGTTGCCTTGTTTGTTGAAATTTCTTTTCAAGAACTTGCTTTGTTATTTCTTTACACTGACTTTACTTTAAAAGTCAATTTCCAGGAAAAAAAAAAAAC
GGATCCTAATGAGGGAAAAGAAAAAACAGAG