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Detailed information on CNT30573001


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SFF9|GL17_ARATH, E-value = 8e-90

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019818Vitis viniferaCitrullus lanatus7.6420.2791.6760forward
CNT30631816Vitis viniferaVigna unguiculata13.762485.19108forward
CNT30140763Vitis viniferaLolium perenne7.5221.0788.1459forward
CNT30155140Vitis viniferaPrunus persica16.6942.2683.97131forward

Expression of CNT30573001

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGGFDPNTALAMVITPGFWLLRPAMATAFMCPMLNWK*

>peptide 2 (36 aa)
CLTDKLLYFNIRTRVHTKRATKESNKPSYSRMIVMR*

Sequence

>CNT30573001
TGCCTAACAGACAAACTGCTTTATTTTAATATTAGGACCAGAGTCCACACCAAAAGAGCTACAAAAGAAAGTAATAAACCCTCTTATTCTAGGATGATTG
TAATGAGGTAATTAAACATCACAAATAGTCATTCAAGCTTGCAAATCAAAGGTTCCTAGCTTCTTCATTTTCTCTATTTCCCCACTAGAATCGTGCTTGA
AGGAATTCAACCACCTTCTTGTCCAACTGGAAGGCCGTTGCCAGGAAATCGGGATTGATGGGTGGATTTGATCCAAACACTGCATTGGCTATGGTGATTA
CACCTGGATTTTGGCTGCTCAGACCAGCAATGGCTACTGCATTCATGTGCCCAATGTTGAATTGGAAGTGAATGAGACCAATAGGGAACACAAAAACATC
CCCCTTGTTTAGAACTTTGCTAAAGAGGCGGTTTTGAGGGTTGGATGTGACAAAGCCAACTAAGAGAGTTCCCTCCAAGACAGTGAGGATCTCAGTGGCA
CGAGGGTGAGTGTGAGGAGGGTTTTGACCATAGGGTGCATAATCGATACGAACCAGTGATATCCCAAGAGTGTTCAGTCCTGGTATCACATCAACATTTA
CTGTAGTGACACTTGAGCCCACTAGATTTGATGTGTTTCCTGGAATATTCAGCCCTTTAGAGAAGAAATCCTCGGCGACGGTCAGGTTTGGGTTCTTGCA
GAACTTTCCATTTACAAACACTGCATTTAAACAAAAAAAAAAAAAAGGGAAAAGAAAAGATAGGTCATTCGTATCAAACCACCAT